Homologs in group_4086
0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.
| Locus tag | Identity | Source | Gene | Product |
|---|
Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).
| Swissprot accession | Eval | Score | ID (%) | N gaps | Alignment length | Annot score | Gene | Description | Organism |
|---|---|---|---|---|---|---|---|---|---|
| P95435 | 8.24e-07 | 47 | 33 | 2 | 109 | 1 | pscG | Type 3 secretion system chaperone PscG | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) |
| Q01248 | 3.26e-05 | 43 | 29 | 1 | 108 | 1 | yscG | Type 3 secretion system chaperone YscG | Yersinia enterocolitica |
| O68690 | 0.00024 | 40 | 29 | 1 | 108 | 1 | yscG | Type 3 secretion system chaperone YscG | Yersinia pestis |
| Source | Morganella psychrotolerans |
|---|---|
| Locus tag | F4V73_RS08380 |
| Feature type | CDS |
| Gene | - |
| Product | YscG family type III secretion protein |
| Location | 1735370 - 1735726 (strand: 1) |
| Length | 357 (nucleotides) / 118 (amino acids) |
| Accession | term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object |
|---|---|
| Length | 2012992 nucleotides |
| Topology | linear |
| Plasmid | False |
| Orthogroup | group_4086 | |
|---|---|---|
| Orthogroup size | 1 | |
| N. genomes | 1 |
| PF09477 | Bacterial type II secretion system chaperone protein (type_III_yscG) |
|---|
MTDYSDERLLAEISLAGILAGKYQEAESIATWLLTQDKKYHESGKLIMVTSWHACKRYTDIINLLSEECSASLLPFKALSEYHIGLNHTLKNTIKTLKSDGNNELMAFAKQFEEDLFL
TCATTAGTAAAATCTATGAAAGATATTATGCAGAATATATTACAAAAAATATGACTGATTATTCGGATGAACGTCTTCTCGCTGAAATTTCTCTGGCCGGTATTCTGGCAGGGAAATATCAGGAGGCAGAGAGTATAGCTACCTGGCTGCTGACACAGGATAAAAAATACCATGAAAGTGGTAAATTAATTATGGTTACGTCCTGGCATGCCTGTAAAAGATATACCGATATAATTAATTTATTATCAGAAGAGTGCTCTGCGTCTCTGCTGCCGTTTAAAGCATTAAGTGAATACCATATTGGTTTGAATCACACCCTTAAAAATACAATAAAAACATTAAAATCCGACGGAAATAACGAATTAATGGCATTTGCCAAACAATTTGAAGAGGATTTATTTTTATGAATGAATATGTGGAAAATGAAACTGAAGAGCAGAAAGCAGAAGACAGCCGC
