Homologs in group_4080

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4080

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4080

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A1JU77 2.35e-07 48 31 0 101 3 yscY Chaperone protein YscY Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P61417 3.41e-07 48 31 0 101 1 yscY Chaperone protein YscY Yersinia pestis
P0C2N2 3.41e-07 48 31 0 101 1 yscY Chaperone protein YscY Yersinia enterocolitica

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08305
Feature type CDS
Gene -
Product hypothetical protein
Location 1722930 - 1723256 (strand: -1)
Length 327 (nucleotides) / 108 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4080
Orthogroup size 1
N. genomes 1

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3914 Posttranslational modification, protein turnover, chaperones (O) O Predicted O-linked N-acetylglucosamine transferase, SPINDLY family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K04060 type III secretion protein Y - -

Protein Sequence

MNQLQIEVLLQQSWLQFQYGFINNSITLLRTLLIYEPDHIRARKILIIALIEDKQGQEALFQCALLHQSGYCDANLLLCEALAFQQEGLHSEALEVYYRYLIKRVCCG

Flanking regions ( +/- flanking 50bp)

TACGTTACTCCTGCTATCCCACAAAAATTTAATGATAAAAGTGTAATGTCATGAATCAATTACAAATTGAAGTATTACTCCAGCAATCCTGGCTACAATTTCAGTATGGGTTTATTAATAACAGTATTACGTTATTACGCACGTTACTTATTTATGAGCCGGATCATATCCGCGCCCGCAAAATATTAATTATTGCATTAATTGAAGATAAGCAGGGGCAGGAAGCGCTGTTTCAGTGCGCATTGCTGCATCAGAGCGGATATTGTGATGCTAATCTGCTGTTGTGTGAGGCGCTGGCTTTTCAGCAGGAGGGGCTGCATAGCGAAGCGCTGGAGGTCTATTACCGTTATCTGATTAAACGGGTGTGCTGTGGCTGATCCCCGTTCATTGCTTCTGCGTATTGCCGGCCGGCAGGATATTTTTCTCG