Homologs in group_4079

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4079

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4079

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23994 1.43e-43 154 40 3 209 4 lcrV Virulence-associated V antigen Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TSQ1 1.04e-42 152 41 4 212 3 lcrV Virulence-associated V antigen Yersinia pestis (strain Pestoides F)
P0C7U7 1.32e-42 152 41 4 212 1 lcrV Virulence-associated V antigen Yersinia pestis
A9R9H4 2.57e-42 151 41 4 212 3 lcrV Virulence-associated V antigen Yersinia pestis bv. Antiqua (strain Angola)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08295
Feature type CDS
Gene -
Product virulence-associated V antigen
Location 1719693 - 1720577 (strand: -1)
Length 885 (nucleotides) / 294 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4079
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF04792 V antigen (LcrV) protein

Protein Sequence

MDGITSINQLNFNVAGDNDPYNAGNYKQVADVLDKYGIKLRNDECKQISPDIIIERFCHKNNITIDKTQLDKNINSILSTVGDSIDMKSLLMVISSGAQKNSIADDILSGMNNSVDSTREIRDNIKEQLHELAIELKIFSIVQSNVNKAMSSSKQEITIDNSGMNLLDPSLYGMTAKEFNGPPPSKEKVFLDKVAGKETTTGDILSIKDFLQSDKKSSPAMTGLENTYAYDKNNNKLGHFASMVGDVSRPLNDLVNEKSTQLNEASNIYNSSIEALTRFIQKLDTLLQDLSRSL

Flanking regions ( +/- flanking 50bp)

TAAATTTGTACCTGAAAGAAGTGAACTCATCCGATAAATAAGGTGGCGCAATGGATGGTATTACAAGTATTAATCAATTGAATTTCAATGTTGCGGGTGATAATGATCCCTATAATGCCGGTAATTACAAACAAGTTGCAGATGTGCTTGATAAGTATGGTATCAAGTTACGAAATGATGAGTGTAAACAGATTTCTCCTGATATTATCATCGAACGCTTTTGTCATAAAAATAATATCACTATTGATAAAACTCAGCTGGATAAAAACATTAACAGTATTCTTTCGACGGTAGGTGATTCGATTGATATGAAGTCATTGCTGATGGTGATTAGCTCCGGCGCTCAGAAAAACAGTATCGCTGATGATATTTTGTCGGGTATGAATAACAGTGTGGATAGCACGCGGGAAATACGTGACAACATCAAAGAACAGTTACATGAACTGGCTATTGAATTAAAAATATTCAGTATTGTTCAGTCTAATGTTAATAAGGCGATGTCATCATCAAAACAGGAAATCACTATTGATAATAGTGGTATGAATCTTCTGGATCCATCATTGTATGGTATGACGGCAAAAGAATTTAACGGACCGCCGCCGTCAAAAGAGAAAGTATTTTTGGATAAAGTAGCGGGTAAGGAAACAACTACCGGAGATATATTGTCAATTAAGGACTTTTTACAGAGTGATAAAAAATCATCACCTGCAATGACAGGACTTGAAAACACATATGCCTATGATAAGAATAATAATAAATTAGGTCATTTTGCCAGTATGGTTGGCGATGTTTCCCGTCCGCTGAATGATCTGGTGAATGAAAAAAGCACTCAATTGAATGAAGCCAGTAATATATATAATTCATCAATTGAAGCATTGACCCGGTTTATTCAAAAACTCGATACGTTACTTCAGGATTTATCAAGATCTCTATAATTAAAGGAAAATAACATGGATGTTGCTGGTAATAACGCAGTAGAAACAGA