Homologs in group_4077

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4077

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4077

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08280
Feature type CDS
Gene sctB
Product type III secretion system translocon subunit SctB
Location 1717163 - 1718050 (strand: -1)
Length 888 (nucleotides) / 295 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4077
Orthogroup size 1
N. genomes 1

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Genomic region

Protein Sequence

MDAIHGPKTAVITMNDIQQPDIKPGKAPESGVKTSVEMGHSPVKNDAAQGDITIAPPKTSADGKESGILDKASSSLADLQSLLSNIKDAKDQISEKLNELKNAASADNLKASASELNLSSNWQIAFSVISGALSLGTMILSSVTEYKDNVAAQQENTLKSGIDKTQGDITKTTDALKNPDLTAESKTALESQLSELKASLVSQQSALSELQAGAETRKAWTDLALNLMQGASGFINDNLITQGKKETETTDNAAKNKGDSLTKLDDIIKKSEAVLDKVKDNAVQAKDFLQVPARA

Flanking regions ( +/- flanking 50bp)

AGTAATCATCATAAAATCAATACATTAATTTATAAAATAGGGAAATAAATATGGATGCAATTCATGGACCGAAAACGGCTGTAATTACAATGAATGATATTCAGCAGCCGGATATTAAACCGGGGAAAGCGCCGGAGTCCGGCGTGAAAACGTCGGTGGAAATGGGGCATTCACCTGTGAAAAATGATGCGGCTCAGGGAGACATCACTATTGCGCCACCTAAAACATCCGCAGACGGAAAAGAGAGTGGCATTCTGGATAAAGCGTCATCGTCACTGGCCGATTTACAATCACTGCTCAGCAATATAAAAGATGCCAAAGATCAGATCAGCGAAAAACTGAATGAACTGAAAAACGCGGCGTCAGCAGATAATCTGAAAGCCTCTGCCTCTGAACTGAATCTGAGTTCAAACTGGCAGATTGCATTCTCCGTTATTTCCGGCGCACTGTCTTTGGGGACAATGATACTGAGCAGTGTGACTGAATATAAGGACAATGTTGCAGCACAACAGGAAAATACACTGAAAAGTGGCATTGATAAAACACAAGGTGATATTACCAAAACGACGGATGCATTGAAAAACCCCGATCTGACCGCAGAAAGCAAAACTGCGCTGGAAAGCCAGTTGTCAGAGCTGAAAGCGTCTCTGGTTTCTCAGCAGAGTGCATTAAGTGAATTACAGGCTGGTGCGGAAACCCGCAAAGCCTGGACAGATCTGGCGCTTAATCTGATGCAGGGTGCGTCTGGTTTTATTAATGACAATTTGATCACTCAGGGTAAAAAAGAAACAGAAACGACGGATAATGCGGCGAAAAATAAAGGTGATTCACTCACTAAGCTGGATGACATTATCAAAAAATCAGAAGCGGTGCTGGATAAAGTAAAAGACAATGCCGTTCAGGCAAAGGACTTTTTACAAGTTCCTGCAAGAGCATAAATATAATCACAATTTTTAACGCAAAGGGCGCAATAGCGCCCTTTTGCTAT