Homologs in group_1652

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10980 FBDBKF_10980 87.8 Morganella morganii S1 - Metal-binding protein
EHELCC_05245 EHELCC_05245 87.8 Morganella morganii S2 - Metal-binding protein
NLDBIP_05565 NLDBIP_05565 87.8 Morganella morganii S4 - Metal-binding protein
LHKJJB_02445 LHKJJB_02445 87.8 Morganella morganii S3 - Metal-binding protein
HKOGLL_15825 HKOGLL_15825 87.8 Morganella morganii S5 - Metal-binding protein
PMI_RS09645 PMI_RS09645 54.4 Proteus mirabilis HI4320 - YecH family protein

Distribution of the homologs in the orthogroup group_1652

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1652

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P46887 2.69e-29 102 59 0 77 4 yecH Uncharacterized protein YecH Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08245
Feature type CDS
Gene -
Product YecH family protein
Location 1713473 - 1713721 (strand: 1)
Length 249 (nucleotides) / 82 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1652
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF10678 Protein of unknown function (DUF2492)

Protein Sequence

MSEKPSVHGHEVMNMIIDNGKNYTTESLIADIHATFGAETRFHTCSADNMDAKDLVSFLAARGKFISNEEGFSTSADKICNH

Flanking regions ( +/- flanking 50bp)

CCCGAAAAGATGCATAATATTTACATCTTTAATAAACAACCGGGGCTATTATGTCTGAGAAACCATCCGTTCATGGTCATGAAGTAATGAATATGATCATCGACAACGGCAAAAACTACACTACAGAATCACTGATTGCGGATATCCATGCGACATTTGGCGCAGAGACACGCTTTCATACCTGCTCTGCCGACAATATGGATGCAAAAGACCTGGTCAGTTTTCTCGCTGCACGCGGAAAATTTATCAGTAATGAAGAAGGGTTCAGCACGTCAGCGGATAAAATCTGTAACCACTGATTTGTAACCACTGAGTGATATGAAAAAATCGCTATCACCTCAGAAAACAC