Homologs in group_338

Help

7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11095 FBDBKF_11095 91.2 Morganella morganii S1 araJ putative arabinose efflux permease AraJ, MFS family
EHELCC_05130 EHELCC_05130 91.2 Morganella morganii S2 araJ putative arabinose efflux permease AraJ, MFS family
NLDBIP_05450 NLDBIP_05450 91.2 Morganella morganii S4 araJ putative arabinose efflux permease AraJ, MFS family
LHKJJB_02330 LHKJJB_02330 91.2 Morganella morganii S3 araJ putative arabinose efflux permease AraJ, MFS family
HKOGLL_15710 HKOGLL_15710 91.2 Morganella morganii S5 araJ putative arabinose efflux permease AraJ, MFS family
PMI_RS09575 PMI_RS09575 68.8 Proteus mirabilis HI4320 - MFS transporter
PMI_RS17510 PMI_RS17510 23.2 Proteus mirabilis HI4320 - MFS transporter

Distribution of the homologs in the orthogroup group_338

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_338

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A7FJX9 4.79e-47 167 33 10 372 3 YpsIP31758_2592 Uncharacterized MFS-type transporter YpsIP31758_2592 Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A4TN28 4.79e-47 167 33 10 372 3 YPDSF_2315 Uncharacterized MFS-type transporter YPDSF_2315 Yersinia pestis (strain Pestoides F)
B2KA13 4.79e-47 167 33 10 372 3 YPTS_1506 Uncharacterized MFS-type transporter YPTS_1506 Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q66CJ8 4.79e-47 167 33 10 372 3 YPTB1405 Uncharacterized MFS-type transporter YPTB1405 Yersinia pseudotuberculosis serotype I (strain IP32953)
Q8ZGC3 4.79e-47 167 33 10 372 3 YPO1380 Uncharacterized MFS-type transporter YPO1380/y2792.1/YP_1213 Yersinia pestis
B1JRE9 7.14e-47 167 33 10 372 3 YPK_2680 Uncharacterized MFS-type transporter YPK_2680 Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
A1JMG4 1.9e-45 163 32 8 368 3 YE1530 Uncharacterized MFS-type transporter YE1530 Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B7LN63 2.65e-45 163 32 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q1RDV7 5.64e-45 162 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli (strain UTI89 / UPEC)
Q8FJC1 5.64e-45 162 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A1A9E1 5.64e-45 162 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli O1:K1 / APEC
B7MS16 5.64e-45 162 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli O81 (strain ED1a)
B7MHL0 5.64e-45 162 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli O45:K1 (strain S88 / ExPEC)
Q0TJF2 6.26e-45 162 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7NAP9 8.84e-45 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q83RZ5 9.12e-45 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Shigella flexneri
Q0T8J4 9.12e-45 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Shigella flexneri serotype 5b (strain 8401)
Q32E16 9.61e-45 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Shigella dysenteriae serotype 1 (strain Sd197)
B1LJW4 9.61e-45 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli (strain SMS-3-5 / SECEC)
P21503 9.61e-45 161 33 6 360 1 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli (strain K12)
B1IW33 9.61e-45 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A7ZYK2 9.61e-45 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli O9:H4 (strain HS)
B1X838 9.61e-45 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli (strain K12 / DH10B)
C4ZQ24 9.61e-45 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli (strain K12 / MC4100 / BW2952)
B5YT34 9.61e-45 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XEB7 9.61e-45 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli O157:H7
B7LD90 9.61e-45 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli (strain 55989 / EAEC)
B7UMY7 9.61e-45 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q3Z3M2 1.59e-44 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Shigella sonnei (strain Ss046)
B6I8X0 1.59e-44 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli (strain SE11)
B7M826 1.59e-44 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli O8 (strain IAI1)
A7ZJW9 1.59e-44 161 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli O139:H28 (strain E24377A / ETEC)
B7NM77 2.68e-44 160 33 6 360 3 ycaD Uncharacterized MFS-type transporter YcaD Escherichia coli O7:K1 (strain IAI39 / ExPEC)
A8AII1 6.85e-44 159 32 6 360 3 CKO_02171 Uncharacterized MFS-type transporter CKO_02171 Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
A4W8S1 4.04e-42 154 33 8 360 3 Ent638_1421 Uncharacterized MFS-type transporter Ent638_1421 Enterobacter sp. (strain 638)
B5QYP8 1.55e-40 150 31 4 358 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella enteritidis PT4 (strain P125109)
B5FQ40 2.77e-40 149 31 4 358 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella dublin (strain CT_02021853)
B5R8I5 2.95e-40 149 32 4 355 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella gallinarum (strain 287/91 / NCTC 13346)
C0PXT4 5.61e-40 149 31 4 355 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella paratyphi C (strain RKS4594)
B4TD28 5.61e-40 149 31 4 355 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella heidelberg (strain SL476)
Q57R33 5.61e-40 149 31 4 355 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella choleraesuis (strain SC-B67)
B5F150 5.61e-40 149 31 4 355 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella agona (strain SL483)
Q8Z810 6.42e-40 149 31 4 355 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella typhi
Q8ZQD2 6.49e-40 149 31 4 358 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TRS9 6.49e-40 149 31 4 358 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella schwarzengrund (strain CVM19633)
B4T132 6.49e-40 149 31 4 358 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella newport (strain SL254)
A9N7X0 4.5e-39 146 31 4 355 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
A9MHY5 5.04e-39 146 30 6 357 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B5BBQ8 2.1e-38 144 31 4 355 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella paratyphi A (strain AKU_12601)
Q5PGH4 2.1e-38 144 31 4 355 3 ycaD Uncharacterized MFS-type transporter YcaD Salmonella paratyphi A (strain ATCC 9150 / SARB42)
O34929 1.4e-07 56 20 5 341 3 yfkF Uncharacterized MFS-type transporter YfkF Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08175
Feature type CDS
Gene -
Product MFS transporter
Location 1699104 - 1700264 (strand: -1)
Length 1161 (nucleotides) / 386 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_338
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF07690 Major Facilitator Superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2814 Carbohydrate transport and metabolism (G) G Predicted arabinose efflux permease AraJ, MFS family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08219 MFS transporter, UMF2 family, putative MFS family transporter protein - -

Protein Sequence

MIHSTSAPRHDSVLIPVAGLTLFAIASGYLMSLIPLSLGSFAIGSEYAGWLASAYYVGLLLGSMLIEPVIARIGHRRSFILFALALAATVVILPFYTELSAWLVSRLLAGFAVAGIFVVIESWLLIGDNPAVRAKRLSFYMTALYGGTTLGQLAIGVFGTAGVVPFAVVIALLLIAVLPLLFSDAQPVCHGGHKNLSLKQIFRLSKPAMVGCMTSGIVMGTIYGLMPLALQEKQYNTEQVGGLMAAIILGGMIIQPVISKLSSRMSKVLLLAMVSLLGVFAMGIIYISGHYLVMVAGLALLGMSSFALYPVAITLACDALTANVIVAATQVMLFCYSVGSAAGPLVAGQFMKQPDGIMNFFFIVLLSTAIYMLLSAVRRKSHILAS

Flanking regions ( +/- flanking 50bp)

GCAACGAACCAGCAGTTTGAATGAATAAGGGTATAGGTGGAGATAGAGCAGTGATTCATAGTACCAGCGCACCGCGTCATGACAGCGTGTTAATCCCTGTCGCGGGTCTGACCCTGTTTGCAATTGCATCCGGTTATCTGATGAGCCTGATCCCGTTGTCGCTGGGTAGCTTTGCTATCGGCAGTGAATACGCAGGCTGGTTAGCCAGTGCTTACTATGTCGGTTTATTACTCGGCTCAATGTTGATTGAACCGGTTATTGCCCGCATTGGTCATCGCCGGTCATTTATTCTGTTCGCCCTGGCACTGGCTGCCACGGTCGTTATTTTACCGTTTTATACTGAACTCAGTGCCTGGCTGGTATCCCGCCTGCTGGCAGGATTTGCGGTTGCCGGTATTTTTGTGGTGATTGAGTCCTGGTTACTGATTGGTGATAACCCGGCTGTCCGGGCCAAACGCCTGAGTTTCTATATGACTGCGCTGTACGGCGGAACCACACTGGGGCAACTGGCTATCGGTGTGTTCGGTACGGCAGGTGTGGTGCCGTTTGCAGTGGTCATCGCCTTACTGTTAATAGCTGTTCTGCCACTGCTGTTCTCCGATGCGCAGCCGGTCTGTCATGGCGGACACAAAAACCTTTCCCTGAAGCAAATTTTTCGGCTGAGTAAACCGGCAATGGTCGGTTGTATGACATCCGGCATCGTGATGGGAACGATTTACGGGCTGATGCCGCTGGCGTTACAGGAAAAACAGTACAATACAGAGCAGGTCGGCGGATTGATGGCGGCAATTATTCTCGGCGGAATGATTATTCAGCCGGTGATCAGTAAATTATCTTCCCGGATGAGTAAAGTATTATTGCTGGCAATGGTGTCTTTGCTTGGCGTATTTGCCATGGGGATCATTTATATTTCCGGGCATTATCTGGTGATGGTTGCCGGGCTGGCATTGCTGGGTATGTCTTCATTTGCGCTTTATCCGGTGGCGATCACGCTGGCGTGTGACGCACTTACTGCAAATGTGATTGTGGCTGCGACTCAGGTTATGCTGTTTTGTTACAGCGTCGGTTCTGCGGCAGGTCCGCTGGTTGCCGGGCAATTTATGAAACAGCCTGATGGCATTATGAATTTCTTTTTTATAGTCCTGTTGTCCACCGCAATTTATATGCTGCTGTCAGCAGTGCGCCGCAAGTCACACATTCTGGCAAGCTGATTGCTCTGCTATACCCTTATTCATTCAAACTGCAGGTGTGTTGGCTGCGG