Homologs in group_3853

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS10915 F4V73_RS10915 34.2 Morganella psychrotolerans - helix-turn-helix transcriptional regulator

Distribution of the homologs in the orthogroup group_3853

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3853

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07900
Feature type CDS
Gene -
Product helix-turn-helix transcriptional regulator
Location 1648885 - 1649160 (strand: 1)
Length 276 (nucleotides) / 91 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3853
Orthogroup size 2
N. genomes 1

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Genomic region

Domains

PF01381 Helix-turn-helix

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1396 Transcription (K) K Transcriptional regulator, contains XRE-family HTH domain

Protein Sequence

MRKKSIPWATAREDILSDPEVNAIYEAELRAERIREQLQSWRSSAVLTSSQVAARPGITPAAVSRTERNAEKATVETLARYAAACGVKIRK

Flanking regions ( +/- flanking 50bp)

TTCATCCATGTTAGCTACCGCTGCACGGCGGTTAGAGGAGATGCTGAACGATGCGTAAAAAATCCATTCCGTGGGCAACAGCCCGCGAAGACATTTTATCCGACCCCGAAGTTAATGCGATCTATGAAGCAGAACTGCGGGCGGAACGAATCAGGGAACAGTTACAGTCATGGCGCAGTTCTGCCGTGCTGACCAGCTCACAGGTCGCTGCACGTCCGGGGATCACACCTGCGGCAGTATCGCGGACAGAACGCAATGCCGAAAAAGCAACGGTTGAGACATTAGCTCGCTATGCGGCTGCGTGTGGCGTAAAAATCCGAAAATAATGTTGTAAGGATCGCTGAGATGAACACGGGCAGACGGTGGCTGAAAGCAC