Homologs in group_3757

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12630 FBDBKF_12630 55.4 Morganella morganii S1 cas8f CRISPR-Cas system type I-F effector complex large subunit Cas8f

Distribution of the homologs in the orthogroup group_3757

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3757

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q02ML9 5.25e-28 115 30 8 295 1 csy1 CRISPR-associated protein Csy1 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q6D0W8 1.99e-19 90 32 7 252 1 csy1 CRISPR-associated protein Csy1 Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07865
Feature type CDS
Gene -
Product type I-F CRISPR-associated protein Csy1
Location 1644118 - 1644987 (strand: -1)
Length 870 (nucleotides) / 289 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3757
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF09611 CRISPR-associated protein (Cas_Csy1)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5943 Defense mechanisms (V) V CRISPR-Cas system type I-F effector complex large subunit Cas8f

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19127 CRISPR-associated protein Csy1 - -

Protein Sequence

MTDPAITAFLAERKTEWLKKKLRGLTKKTDIDGLRQYSEVVFSLAQWLPRAAVRAGQISLSTHPCTFTHPCARQNSMNTGGIAGNNTVTAVIAQAKQENDGFLRSGNIPTEPDALGNAAALDIYRFLMLKMQDNRTLLTHIDEESSLAKLLLSHGDYSVLRKGFLQVVTGKKSAVTSSKVKQVYFPVFDNIAGDNYHLLSVLTPSGILFELRRRIEFIRRSAVDKIEQNKNNKRNIESFRTIDGVTIIRFGGGKPQNISVFNNDNAGKACLLLSVPPGFKCQEVQDSVR

Flanking regions ( +/- flanking 50bp)

AAACTGACTCATATAACGGAATGATTGAGTGTAATCATAAGGGATGTACTATGACAGATCCGGCAATTACTGCATTTCTTGCAGAACGTAAAACAGAGTGGTTGAAAAAAAAACTGAGAGGGTTAACAAAAAAAACGGATATTGATGGGTTAAGGCAATACAGTGAAGTCGTTTTTTCTTTGGCTCAGTGGTTACCGCGTGCGGCAGTACGTGCCGGTCAGATATCCCTTTCGACTCATCCGTGTACATTTACGCACCCCTGCGCTCGTCAAAATAGCATGAATACAGGTGGTATTGCCGGTAATAACACGGTTACCGCTGTTATTGCGCAGGCAAAACAAGAGAATGATGGTTTTTTGCGTTCCGGTAATATACCGACGGAGCCTGATGCGCTGGGTAATGCCGCCGCACTGGATATATACAGATTTCTGATGCTGAAAATGCAGGATAACCGCACATTACTGACGCATATAGATGAAGAAAGTTCTCTGGCAAAATTACTGTTGAGTCACGGGGACTACAGTGTATTGCGCAAAGGTTTTCTACAGGTGGTAACCGGTAAAAAATCAGCGGTGACCAGTTCAAAAGTAAAACAAGTTTATTTCCCTGTTTTTGACAATATAGCCGGAGATAATTACCATTTACTTTCTGTCCTGACACCATCCGGTATATTGTTTGAATTACGTCGGCGTATTGAGTTTATCAGGCGGTCAGCCGTAGATAAAATAGAACAGAATAAGAATAACAAAAGAAATATTGAATCATTCCGAACTATTGATGGCGTTACTATTATCCGGTTTGGCGGAGGTAAACCTCAGAATATTTCTGTGTTTAATAATGATAATGCAGGGAAAGCCTGTTTGTTATTATCTGTTCCTCCGGGATTTAAATGTCAGGAGGTGCAGGATAGTGTCCGCTGATTATATTTTACTACCCCGTATTAATATTCATAATGCAAATGCGTTATCAG