Homologs in group_3756

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12625 FBDBKF_12625 53.0 Morganella morganii S1 - CRISPR-associated protein Csy2

Distribution of the homologs in the orthogroup group_3756

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3756

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q02MM0 1.1e-43 155 33 10 309 1 csy2 CRISPR-associated protein Csy2 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q6D0W7 3.16e-36 135 29 9 300 1 csy2 CRISPR-associated protein Csy2 Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07860
Feature type CDS
Gene csy2
Product type I-F CRISPR-associated protein Csy2
Location 1643217 - 1644200 (strand: -1)
Length 984 (nucleotides) / 327 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3756
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF09614 CRISPR-associated protein (Cas_Csy2)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5933 Defense mechanisms (V) V CRISPR-Cas system type I-F effector complex subunit Cas5f/Csy2, RAMP superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19128 CRISPR-associated protein Csy2 - -

Protein Sequence

MIMQGKPVCYYLFLRDLNVRRCRIVSADYILLPRINIHNANALSGPFTVGFPAVTAWMGFIHALGRKLSDVGFPFIRLSYTGIVCHSFNLQVYKSPEDITYLITGKGKPLNRNGRKASFIEEARCHLNVSLFIYCNHQNMDKSRLQDVVYDLLLTMKIAGGDILSVSAPVIGTLSDDNRDNNRLLRKMMPGYALLERRDLMSDAMDRGEDAMDALLNYIAVTREYVGEKNSKGKKRVKWHNRRKAPGWIIPVVTGFQGISAPGNAENQRAEGVIHRFAESVVTLGEFRRVDKLRHPADMWWEYSYQKEKNLYLCQQVRSYFPGRGEH

Flanking regions ( +/- flanking 50bp)

TATTATCCGGTTTGGCGGAGGTAAACCTCAGAATATTTCTGTGTTTAATAATGATAATGCAGGGAAAGCCTGTTTGTTATTATCTGTTCCTCCGGGATTTAAATGTCAGGAGGTGCAGGATAGTGTCCGCTGATTATATTTTACTACCCCGTATTAATATTCATAATGCAAATGCGTTATCAGGACCATTCACTGTTGGCTTTCCGGCAGTAACTGCCTGGATGGGATTTATTCATGCACTGGGGAGAAAACTATCAGATGTCGGGTTTCCTTTTATCCGGTTGAGTTACACCGGCATTGTCTGCCACAGTTTTAATTTACAGGTTTATAAGTCACCTGAGGATATAACCTATTTGATTACCGGAAAAGGAAAGCCATTAAATAGAAATGGCAGAAAGGCATCATTTATTGAAGAAGCCCGGTGTCATTTAAATGTGTCATTATTTATCTATTGCAACCATCAAAATATGGATAAGAGTCGGTTACAGGACGTTGTTTATGATTTATTGCTGACTATGAAAATAGCCGGCGGGGATATATTGTCTGTATCAGCACCGGTTATCGGGACGTTGTCGGATGATAACCGTGACAATAATCGTCTGCTGCGCAAAATGATGCCCGGTTATGCATTACTTGAGCGCCGTGACCTGATGTCGGATGCGATGGATCGCGGAGAAGATGCAATGGATGCACTGCTCAATTATATCGCTGTCACCCGGGAGTATGTCGGAGAAAAAAACAGCAAAGGGAAGAAAAGAGTTAAATGGCACAACCGGCGTAAAGCGCCGGGGTGGATAATCCCTGTTGTGACCGGTTTTCAGGGTATTTCTGCACCCGGAAATGCGGAAAATCAGCGGGCAGAGGGCGTTATTCATCGTTTTGCCGAGAGCGTTGTGACATTGGGGGAGTTCAGGCGGGTTGATAAATTACGCCATCCTGCTGATATGTGGTGGGAGTATTCATATCAAAAAGAAAAAAACCTTTATTTGTGTCAGCAGGTTCGTTCTTATTTTCCGGGCCGGGGAGAACATTGATGGATGAACACAGGGATGTGGTGTCTGTTTTATCATTTGAGAAAAAATTA