Homologs in group_3751

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12600 FBDBKF_12600 71.7 Morganella morganii S1 - GH3 auxin-responsive promoter

Distribution of the homologs in the orthogroup group_3751

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3751

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0C0M2 1.56e-06 54 30 3 134 2 GH3.2 Probable indole-3-acetic acid-amido synthetase GH3.2 Oryza sativa subsp. japonica
Q9LSQ4 3.18e-05 50 27 4 137 1 GH3.6 Indole-3-acetic acid-amido synthetase GH3.6 Arabidopsis thaliana
O82243 6.39e-05 49 26 5 138 2 GH3.9 Putative indole-3-acetic acid-amido synthetase GH3.9 Arabidopsis thaliana
Q9FZ87 0.000885 45 27 6 140 1 GH3.17 Indole-3-acetic acid-amido synthetase GH3.17 Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07835
Feature type CDS
Gene -
Product GH3 auxin-responsive promoter family protein
Location 1635997 - 1637544 (strand: -1)
Length 1548 (nucleotides) / 515 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3751
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF03321 GH3 auxin-responsive promoter

Protein Sequence

MDNAWRHFRRWSPPRTEKYSLRECQSRWLAACLAANKTCAYGQLHHFDTVISMSDYQQTVPLTTYHDLAPWITRVAEGEDNLLYNAPTLAFEMTGGSHSGGKLLPYTAAGLNDFRLAMIGWLHDVADNFDLTHGRVYWALSPAVTRITQTPCGLPVGGGDALYLGDENITAFSTLSAVPLSLGQVEDPADWQLLTLVYLLYCDDLRLMSVWSPAFLFPLLNALDSRRAEITALLSRGGELAGHSLTANPAALSRYRDYLDNHNTEVLWPALTLISCWDQASSGPLARALMARFPSVTLQGKGLLSTEAVITIPSVGGDPHLSIDSNFYEFSHHSGHLFLADELECGETYSVIVTTNSGLYRYQTDDRVLCTGHSEEGIPRLRFIGRDGVNSDLVGEKLTEPFVCAGLSALQDFAVLAADPDAPGYVLLLSDSTMNDEQAQESCDEVEHYLCSNPQYLYARRLGQLNPLTYYRLHEPVEHYFRLQLQQSKRLGEIKIPVLLTTPDWRTMFDLREFP

Flanking regions ( +/- flanking 50bp)

CCACCCACGCTTTCAGTCACTTTTTACCCGGCCCGATGTTGAGTTCTGTCATGGATAACGCATGGCGTCATTTCCGGCGCTGGTCACCTCCCCGTACTGAAAAATACTCACTGCGCGAATGCCAGTCCCGGTGGCTGGCAGCCTGCCTTGCTGCTAATAAAACCTGTGCTTACGGGCAGTTACATCATTTTGATACTGTAATATCCATGTCTGATTACCAGCAGACGGTCCCTCTGACCACCTATCATGACCTTGCACCATGGATAACCCGTGTGGCAGAAGGTGAGGACAATCTACTTTATAACGCACCGACTCTGGCATTTGAAATGACCGGCGGCAGCCACAGCGGCGGCAAATTACTGCCTTATACGGCCGCCGGTCTGAATGATTTCCGTCTGGCCATGATTGGCTGGTTACATGATGTGGCAGATAATTTTGATCTGACTCACGGGCGGGTCTACTGGGCGCTGAGCCCGGCGGTTACCCGGATAACGCAGACTCCCTGCGGATTACCGGTCGGTGGCGGTGATGCATTGTATCTGGGAGACGAAAATATCACGGCATTCAGTACATTATCAGCGGTTCCCCTGAGCCTGGGGCAAGTGGAAGACCCGGCAGACTGGCAGTTGCTTACACTGGTTTATCTTTTGTATTGTGACGATTTACGCCTGATGTCTGTCTGGAGCCCGGCATTTTTGTTTCCGCTGCTTAATGCACTTGATTCACGCCGGGCTGAGATTACCGCACTGCTGAGCCGGGGCGGAGAGCTTGCGGGACATTCGCTGACGGCAAACCCGGCGGCGCTTTCGCGTTACCGTGATTATCTGGACAACCATAATACAGAGGTGTTATGGCCCGCGCTGACACTGATCAGCTGCTGGGATCAGGCCTCTTCCGGGCCGCTGGCGCGTGCGCTGATGGCGCGCTTTCCGTCAGTGACACTTCAGGGTAAAGGGCTGCTTTCCACCGAAGCGGTGATCACCATCCCGTCTGTCGGGGGTGATCCGCACCTGAGTATTGACAGTAATTTCTATGAATTCAGCCACCATTCCGGGCATCTTTTTCTTGCAGATGAACTGGAGTGCGGTGAAACATACAGTGTGATTGTGACCACCAACAGCGGGCTGTACCGCTATCAGACAGACGACCGGGTGTTATGCACCGGGCACAGTGAAGAGGGTATCCCCCGGCTGCGTTTTATAGGGCGCGATGGTGTTAACAGTGATTTGGTCGGGGAAAAACTGACTGAACCCTTTGTCTGCGCCGGGTTATCTGCATTACAGGATTTTGCCGTGCTTGCCGCCGATCCGGATGCGCCGGGCTATGTCCTGCTGCTCAGTGACTCAACTATGAATGATGAGCAGGCGCAGGAGAGCTGTGACGAGGTTGAACATTACCTGTGCAGCAATCCGCAATACCTTTATGCGAGACGCCTCGGGCAGCTTAATCCGCTGACATATTACCGCCTGCATGAGCCGGTGGAGCACTATTTCCGCTTACAGTTACAACAGTCGAAACGGCTGGGAGAGATAAAAATCCCGGTCCTGCTGACAACACCGGATTGGCGGACCATGTTTGACCTCAGGGAGTTTCCGTGATGACACAGACTATGTATTCGCCACAGCGTCCGCTTGATCTGGTGCTGCTT