Homologs in group_3840

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS13880 PMI_RS13880 39.7 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_3840

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3840

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07770
Feature type CDS
Gene -
Product hypothetical protein
Location 1622005 - 1622664 (strand: -1)
Length 660 (nucleotides) / 219 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3840
Orthogroup size 2
N. genomes 2

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Genomic region

Protein Sequence

MSNFDKTDGQFHEFTSPLNEGDFFALPVESSVPEGVTPIIDESTGLCIGYLYGMNGVYHIYDINGHYQTVYEMPLESPLFDPLDLLLAGGVVAKLCGRTSLLMRGGATRAVSSGGVKLSMQIVSSLKSRLTLSATATKMRYSPQAVRAMSDRSRYVPDYILSKVIRNGRQTEVLIAASGEQLSKYSMTIKKYRYNGQFADIYLNVIVDTNKKIIKEFNY

Flanking regions ( +/- flanking 50bp)

GTTCAGCGCATGCTTTAAAGGGAATTTATTTTTAAATTAAGGATATATCAATGTCGAATTTTGATAAGACTGACGGACAATTCCATGAGTTTACATCGCCGCTGAATGAAGGGGATTTTTTTGCATTACCGGTTGAGTCATCTGTACCTGAAGGTGTAACACCTATTATTGATGAATCGACAGGGCTGTGTATTGGTTATCTGTATGGCATGAACGGGGTTTATCATATTTATGATATTAATGGCCACTACCAGACAGTGTATGAAATGCCGCTGGAGTCGCCGTTGTTTGACCCGCTGGATCTCCTGCTGGCAGGCGGTGTGGTGGCGAAACTGTGCGGGCGAACTTCTTTACTGATGCGCGGCGGTGCCACCCGGGCTGTCAGCAGCGGCGGCGTGAAACTGAGTATGCAAATTGTCTCATCACTGAAAAGCCGTCTGACACTGAGTGCCACGGCAACAAAAATGAGATATTCGCCGCAGGCCGTCAGAGCCATGAGTGATCGCAGCCGTTATGTGCCGGATTATATTCTCAGTAAAGTTATCAGAAATGGCAGGCAGACCGAGGTATTAATTGCGGCATCCGGTGAGCAACTGAGTAAATATTCGATGACAATTAAAAAATACCGTTATAACGGACAGTTTGCGGATATTTATCTGAACGTTATTGTTGATACAAATAAGAAAATAATAAAAGAATTTAATTATTGAGTGTGGCGGATGTCATTATAAGGTGATGTAAAAACGCATCACCTTATGTC