Homologs in group_2939

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14855 FBDBKF_14855 60.4 Morganella morganii S1 - Type 1 fimbrial protein
EHELCC_15660 EHELCC_15660 60.4 Morganella morganii S2 - Type 1 fimbrial protein
NLDBIP_16190 NLDBIP_16190 60.4 Morganella morganii S4 - Type 1 fimbrial protein
LHKJJB_15650 LHKJJB_15650 60.4 Morganella morganii S3 - Type 1 fimbrial protein
HKOGLL_14770 HKOGLL_14770 60.4 Morganella morganii S5 - Type 1 fimbrial protein

Distribution of the homologs in the orthogroup group_2939

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2939

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07655
Feature type CDS
Gene -
Product type 1 fimbrial protein
Location 1602055 - 1602408 (strand: -1)
Length 354 (nucleotides) / 117 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2939
Orthogroup size 6
N. genomes 6

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Genomic region

Protein Sequence

MSHLKTIIIGILFSLSATVTSVPAMNEGTILLAGSVVNAACEVRVLTPGKQQSGKQPDRQSPAFEYSCLRDGRSDNIRDTITDGELSEGRLPQSAGRTSYVVLSEQRGEAYLRVDYF

Flanking regions ( +/- flanking 50bp)

ATAACGTTAACAGGCGTTTGTCAGAATGAAAGTAACAGCGGGGTGCCTGTGTGAGTCATCTGAAAACGATTATCATTGGTATATTGTTCAGCTTATCTGCAACTGTGACATCTGTGCCCGCAATGAATGAAGGCACTATTTTGCTGGCAGGCAGTGTGGTGAATGCGGCGTGTGAGGTACGTGTACTGACGCCCGGCAAGCAACAGTCCGGAAAACAACCGGACAGGCAATCACCTGCTTTCGAATATAGCTGTTTGCGTGATGGCAGGTCAGACAATATCCGCGATACCATAACGGACGGTGAATTATCGGAGGGACGACTGCCACAGTCGGCGGGGCGGACATCCTATGTTGTGCTGAGTGAACAGCGCGGCGAGGCGTATTTGCGGGTGGATTATTTCTGAGCGCAAGTGAGCGGAAGTATGAACGCACCTGAGTTATCCGGTTTCCGCCG