Homologs in group_542

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01265 FBDBKF_01265 94.1 Morganella morganii S1 - ParD-like family protein
EHELCC_00280 EHELCC_00280 94.1 Morganella morganii S2 - ParD-like family protein
NLDBIP_03180 NLDBIP_03180 94.1 Morganella morganii S4 - ParD-like family protein
LHKJJB_04695 LHKJJB_04695 94.1 Morganella morganii S3 - ParD-like family protein
HKOGLL_02350 HKOGLL_02350 94.1 Morganella morganii S5 - ParD-like family protein
PMI_RS04835 PMI_RS04835 76.9 Proteus mirabilis HI4320 - ParD-like family protein

Distribution of the homologs in the orthogroup group_542

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_542

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07305
Feature type CDS
Gene -
Product ParD-like family protein
Location 1524114 - 1524320 (strand: -1)
Length 207 (nucleotides) / 68 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_542
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system

Protein Sequence

MGIVKISDELHVYLRRASNVMSRSINAQAEFWIKIGMQAEMNPDKTFTMLISEMLEKESLSRKGEQHE

Flanking regions ( +/- flanking 50bp)

CATATGAACCATATCTGTTTCATATATGGTTTATCAGTAAAGGATTTCACGTGGGTATTGTTAAAATCTCCGATGAATTACATGTTTATCTGCGCCGTGCGAGCAATGTAATGTCACGCTCAATCAATGCACAGGCGGAATTCTGGATAAAAATCGGTATGCAGGCTGAAATGAATCCCGATAAAACCTTCACAATGCTTATCAGTGAGATGCTGGAAAAAGAGTCACTGAGCCGGAAAGGAGAGCAGCATGAGTAGTATCGTTATTAAAACAGCCGCGGAAATCGAACTGATGCGGGAGTCAGGTC