Homologs in group_535

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01190 FBDBKF_01190 80.6 Morganella morganii S1 qseG two-component system QseEF-associated lipoprotein QseG
EHELCC_00355 EHELCC_00355 80.6 Morganella morganii S2 qseG two-component system QseEF-associated lipoprotein QseG
NLDBIP_03105 NLDBIP_03105 80.6 Morganella morganii S4 qseG two-component system QseEF-associated lipoprotein QseG
LHKJJB_04620 LHKJJB_04620 80.6 Morganella morganii S3 qseG two-component system QseEF-associated lipoprotein QseG
HKOGLL_02425 HKOGLL_02425 80.6 Morganella morganii S5 qseG two-component system QseEF-associated lipoprotein QseG
PMI_RS09245 PMI_RS09245 38.9 Proteus mirabilis HI4320 qseG two-component system QseEF-associated lipoprotein QseG

Distribution of the homologs in the orthogroup group_535

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_535

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AD46 1.23e-39 140 36 4 225 3 yfhG Uncharacterized protein YfhG Shigella flexneri
P0AD44 1.23e-39 140 36 4 225 3 yfhG Uncharacterized protein YfhG Escherichia coli (strain K12)
P0AD45 1.23e-39 140 36 4 225 1 qseG Quorum-sensing regulator protein G Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07260
Feature type CDS
Gene qseG
Product two-component system QseEF-associated lipoprotein QseG
Location 1511075 - 1511854 (strand: -1)
Length 780 (nucleotides) / 259 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_535
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF13942 YfhG lipoprotein

Protein Sequence

MIFKSLIAVVPLLLTGCVKTSTPPVLSSLAAAVLPHERTVDYRIADCHTLWELDSAAATENGLYWLRMMDCADLLNSDTARIMAGKITADSWDTVFRQSILLDNTGSSANDKRKVLDTLNTFSAGFPVSLRPLMKLWREQLKLTITLSDERQRYRRLQSETDGKIDQLRAVNSRLQYELQTTTRKLDNLSNIERQLAGRKQPAKADAEPESAQEERSEALKEAAATDEAAAPPVKAKPVAESTPAEKPAESKPAQNKKE

Flanking regions ( +/- flanking 50bp)

GCTTCCGTTCCACACCTTACTGGAATAACAGGTCAGCTATTAATTTGAACATGATATTTAAGTCCCTGATTGCCGTCGTGCCGCTGTTACTGACCGGCTGTGTAAAAACGTCAACCCCGCCGGTTCTTTCATCGCTGGCGGCGGCAGTATTGCCACATGAGCGCACTGTCGATTACCGGATAGCAGACTGTCATACGCTCTGGGAGCTTGATTCTGCGGCTGCAACAGAAAACGGACTTTACTGGCTGCGGATGATGGACTGCGCTGATTTGCTCAACAGTGATACCGCACGGATAATGGCAGGGAAAATCACAGCGGACAGTTGGGATACCGTATTCCGTCAGAGTATTTTGCTGGATAACACCGGCAGCTCTGCCAATGACAAACGCAAAGTGCTCGATACACTCAATACCTTCAGCGCAGGCTTCCCGGTTTCACTGCGCCCGTTAATGAAACTGTGGCGCGAACAATTAAAACTGACGATTACGCTGAGTGACGAGCGCCAGCGTTACCGCCGTCTTCAGAGTGAAACCGACGGAAAAATTGATCAGTTACGCGCAGTGAATTCCCGCCTGCAATATGAATTGCAGACTACGACCCGCAAATTGGACAATCTGAGTAATATCGAACGCCAGCTTGCCGGACGTAAACAGCCGGCAAAAGCCGATGCGGAGCCTGAAAGTGCTCAGGAAGAGCGAAGTGAAGCATTAAAAGAGGCAGCGGCTACTGATGAAGCCGCAGCGCCGCCGGTAAAAGCGAAACCTGTTGCTGAGTCAACACCGGCTGAAAAACCGGCAGAAAGCAAACCGGCACAGAATAAAAAGGAGTAACTCAGGCATGACAGCACGCCGCAGCGCAAATTTATTATTAGTTGATGACG