Homologs in group_493

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00890 FBDBKF_00890 92.9 Morganella morganii S1 ttrC tetrathionate reductase subunit TtrC
EHELCC_00655 EHELCC_00655 92.9 Morganella morganii S2 ttrC tetrathionate reductase subunit TtrC
NLDBIP_02805 NLDBIP_02805 92.9 Morganella morganii S4 ttrC tetrathionate reductase subunit TtrC
LHKJJB_04320 LHKJJB_04320 92.9 Morganella morganii S3 ttrC tetrathionate reductase subunit TtrC
HKOGLL_02725 HKOGLL_02725 92.9 Morganella morganii S5 ttrC tetrathionate reductase subunit TtrC
PMI_RS08230 PMI_RS08230 61.1 Proteus mirabilis HI4320 ttrC tetrathionate reductase subunit TtrC

Distribution of the homologs in the orthogroup group_493

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_493

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9Z4S7 4.07e-114 338 52 1 340 1 ttrC Tetrathionate reductase subunit C Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06885
Feature type CDS
Gene ttrC
Product tetrathionate reductase subunit TtrC
Location 1426887 - 1427951 (strand: -1)
Length 1065 (nucleotides) / 354 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_493
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF03916 Polysulphide reductase, NrfD

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3301 Inorganic ion transport and metabolism (P) P Nitrite/polysulfide reductase, membrane component NrfD/PsrC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08359 tetrathionate reductase subunit C Sulfur metabolism
Metabolic pathways
Microbial metabolism in diverse environments
Two-component system		 -

Protein Sequence

MIEQTMLIQEVLARPQEITWLPWAVQYFFMIGIAACAALYACWQRWRGDKRDARLEMLAVFISITLGIAAPLALTADLHQTARVWHFYAYPTPWSWMPWGAVFLPAFTGCIGLYFLALVADKIWGKQFKLTRWVALGSAAFAIGLLLYTGREVSVVRAHPIWFSYWIPVLLFFSALQALPALMMLGARREPQYQAQLARLQIVSLLLLAVSMGFWIAGDTLSGAAIRAQLSFGSTGWTMAMGEVVLWIALMVLAVRLLTGRRSVAYITVHAVLTLLLTWSLRWMLLMSVQTLPKYNVMHNPYSLPMGTDGIQAIIGTVGLWIALVIIFREGIRWVNNKVQNKQNITQDGGVQHG

Flanking regions ( +/- flanking 50bp)

CAACCGCTGGAAAATCGCGGTCAGCCCGCATTATGGCAGGAGATCCACTGATGATTGAACAGACAATGTTAATTCAGGAAGTGCTGGCCCGCCCGCAGGAAATCACCTGGCTGCCGTGGGCAGTGCAATACTTCTTTATGATAGGGATTGCCGCCTGCGCCGCGCTTTATGCCTGCTGGCAGCGCTGGCGTGGTGATAAACGTGATGCCCGCCTTGAGATGCTGGCCGTTTTTATCAGTATCACACTAGGTATTGCCGCACCGTTGGCACTGACGGCTGATCTGCATCAGACTGCCCGCGTCTGGCATTTTTATGCGTATCCGACACCGTGGTCGTGGATGCCTTGGGGGGCGGTATTCCTGCCTGCATTCACCGGCTGTATCGGTTTGTATTTTCTGGCGCTGGTGGCGGATAAAATATGGGGTAAACAATTTAAACTGACCCGCTGGGTGGCACTCGGCAGCGCGGCATTTGCAATCGGGCTGCTGTTATACACCGGACGCGAGGTGTCTGTTGTCCGCGCTCATCCGATCTGGTTCAGTTATTGGATACCGGTACTGTTGTTTTTCAGTGCATTACAGGCATTACCGGCGCTTATGATGCTGGGTGCGCGCCGCGAACCGCAGTATCAGGCACAGCTTGCCCGCTTACAGATAGTGTCATTGCTGCTGCTGGCAGTGAGTATGGGCTTCTGGATTGCGGGAGACACGCTTTCCGGAGCCGCTATCCGCGCACAACTGAGTTTCGGCAGCACCGGATGGACAATGGCAATGGGCGAAGTCGTGCTGTGGATTGCCCTGATGGTACTGGCTGTGCGTCTTCTGACCGGTCGCCGTTCAGTGGCTTATATCACCGTCCATGCGGTACTGACCCTGTTACTCACCTGGTCGCTGCGCTGGATGCTGCTGATGAGTGTGCAGACCTTACCGAAATACAATGTTATGCATAACCCGTACAGCCTGCCGATGGGCACTGACGGTATCCAGGCGATTATCGGCACTGTCGGCTTGTGGATAGCCCTGGTGATTATATTCCGTGAAGGTATTCGCTGGGTAAATAATAAAGTACAGAATAAACAAAATATTACGCAGGACGGGGGTGTACAGCATGGCTAAGTCAACAAGACGTCAGTGGTTAAAAGCAGGTTTGGCGGTCGGCGGGCTGG