Homologs in group_3837

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS13450 F4V73_RS13450 47.4 Morganella psychrotolerans - type II toxin-antitoxin system RelE/ParE family toxin

Distribution of the homologs in the orthogroup group_3837

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3837

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O53332 1.94e-19 80 40 1 98 3 higB3 Putative toxin HigB3 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
O53468 3.18e-19 81 38 2 115 1 higB2 Putative toxin HigB2 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06865
Feature type CDS
Gene -
Product type II toxin-antitoxin system RelE/ParE family toxin
Location 1421406 - 1421759 (strand: -1)
Length 354 (nucleotides) / 117 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3837
Orthogroup size 2
N. genomes 1

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Genomic region

Domains

PF05973 Phage derived protein Gp49-like (DUF891)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4683 Function unknown (S) S Uncharacterized conserved protein

Protein Sequence

MWTIVTTDTFTAWLAVQHKSDRAAVLAAMLVLQVQGPGLSRPYSDTIKGSLYMNMKELRIQSRGEPIRAFYAFDPGRRGVLLCAGNKTGNEKRFYAQMIAQADREFTDWLNALKNRR

Flanking regions ( +/- flanking 50bp)

TATTGCTTTACAGCGATATAGCTTATAATCTATATTAGTGAGGATGCACTGTGTGGACGATTGTGACGACGGATACGTTTACTGCGTGGCTTGCCGTGCAACATAAATCAGATCGTGCTGCTGTACTGGCGGCGATGCTTGTATTACAGGTTCAGGGGCCGGGATTATCGCGCCCCTACAGTGACACCATTAAAGGTTCACTGTACATGAATATGAAAGAGTTGCGGATCCAAAGCAGGGGTGAACCGATACGGGCATTTTATGCATTTGATCCCGGACGCCGTGGCGTTTTATTGTGTGCCGGTAATAAAACCGGAAATGAAAAACGATTCTATGCACAGATGATTGCGCAGGCAGATCGGGAGTTCACTGACTGGCTGAATGCACTAAAGAACAGGAGGTAAAGATGGGGAAATCACTGGAGCAACTGCTTGCAGATGAAACACCTGAAGTG