Homologs in group_3834

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS02410 PMI_RS02410 75.0 Proteus mirabilis HI4320 - DUF1364 domain-containing protein

Distribution of the homologs in the orthogroup group_3834

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3834

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P68661 1.89e-42 136 69 0 94 1 ybcO Putative nuclease YbcO Escherichia coli (strain K12)
P68662 1.89e-42 136 69 0 94 3 ybcO Putative nuclease ybcO Enterobacteria phage 82

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06190
Feature type CDS
Gene -
Product DUF1364 domain-containing protein
Location 1302160 - 1302450 (strand: -1)
Length 291 (nucleotides) / 96 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3834
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF07102 Putative nuclease YbcO

Protein Sequence

MANLRKEARGRECQIRIPGVCNGNPETVVLAHYRMVGLCGTGMKPDDMFGAWACIACHDEIDRRTRLTDAEYARMCHLEGVIRTQAQLLEEGKIST

Flanking regions ( +/- flanking 50bp)

TGGGTGATATTTTCACTCTGCCTGGGTATCTATGAATACTGGTGGTGATTATGGCTAACTTACGAAAAGAAGCGCGGGGCAGAGAATGCCAAATTCGTATTCCGGGAGTGTGTAACGGCAACCCTGAAACTGTGGTATTGGCTCATTATCGGATGGTGGGATTATGTGGCACCGGAATGAAGCCTGACGACATGTTCGGAGCGTGGGCGTGTATTGCGTGTCATGATGAGATAGACCGGCGTACACGGCTGACGGATGCGGAATATGCAAGGATGTGCCACCTCGAAGGTGTTATCAGGACGCAGGCACAACTTCTGGAGGAGGGGAAGATATCGACATGAATCAATACCACCTGAAATTGCCGTGGCCACCGTCAAATAATACGTACTGG