Homologs in group_107

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10 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00185 FBDBKF_00185 23.2 Morganella morganii S1 - Phage antitermination protein Q
FBDBKF_12355 FBDBKF_12355 18.8 Morganella morganii S1 - Antitermination protein Q
FBDBKF_12850 FBDBKF_12850 43.4 Morganella morganii S1 - Phage antitermination protein Q
EHELCC_01360 EHELCC_01360 23.2 Morganella morganii S2 - Phage antitermination protein Q
NLDBIP_02100 NLDBIP_02100 23.2 Morganella morganii S4 - Phage antitermination protein Q
LHKJJB_03615 LHKJJB_03615 23.2 Morganella morganii S3 - Phage antitermination protein Q
HKOGLL_03430 HKOGLL_03430 23.2 Morganella morganii S5 - Phage antitermination protein Q
PMI_RS04475 PMI_RS04475 25.2 Proteus mirabilis HI4320 - antiterminator Q family protein
PMI_RS04675 PMI_RS04675 21.1 Proteus mirabilis HI4320 - antiterminator Q family protein
PMI_RS04845 PMI_RS04845 19.7 Proteus mirabilis HI4320 - antiterminator Q family protein

Distribution of the homologs in the orthogroup group_107

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_107

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O48429 1.18e-06 48 30 2 90 3 Q Antitermination protein Q Enterobacteria phage H19B
P68923 1.95e-06 48 30 2 90 3 Q Antitermination protein Q Enterobacteria phage VT2-Sa
P68922 1.95e-06 48 30 2 90 3 Q Antitermination protein Q Escherichia phage 933W
Q47274 0.000279 42 26 1 82 3 quuD Prophage antitermination protein Q homolog QuuD Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06180
Feature type CDS
Gene -
Product antiterminator Q family protein
Location 1301099 - 1301602 (strand: -1)
Length 504 (nucleotides) / 167 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_107
Orthogroup size 11
N. genomes 7

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Genomic region

Domains

PF06530 Phage antitermination protein Q

Protein Sequence

MSYIGEKELTKDQLDWLNQWLELWGAWVHSGRIDIRKINMIYKFMQTVEPDKNPTRPMCNDDDGMLISQVVDSVIATDAQAYAILLSYYANGSSKLAIASYYHGVAKPRKMQTRGGNKIRRPSLGTCRNEVNDKLKAAQWVLYEPLRIAMNSRKRVGKIRKITELCY

Flanking regions ( +/- flanking 50bp)

TACAGCACCCGGTACGACTGCCACAAGCACACTGTATTGCCGGAGGTAAGATGAGCTATATCGGAGAAAAGGAACTCACAAAGGATCAGTTGGACTGGCTTAATCAGTGGCTGGAACTGTGGGGTGCGTGGGTTCACTCGGGCAGGATTGATATCCGCAAAATAAATATGATTTATAAGTTTATGCAGACGGTAGAGCCGGATAAAAACCCGACCAGACCAATGTGTAATGACGATGACGGAATGTTGATTTCTCAGGTCGTAGATTCCGTCATCGCCACTGACGCACAGGCGTATGCGATATTACTCAGTTACTATGCCAACGGGTCATCTAAGCTGGCGATTGCATCTTACTATCACGGAGTTGCAAAACCACGCAAAATGCAAACGAGGGGAGGGAATAAAATCAGGCGTCCGTCACTCGGGACTTGTCGTAATGAGGTCAACGATAAACTCAAGGCGGCTCAATGGGTTTTGTATGAACCGTTGCGAATTGCAATGAACAGTCGCAAACGAGTGGGTAAAATACGTAAAATAACCGAACTTTGCTATTGACTTACTTTATCGAATTAGCAATACTTATCAGGTAAGTTGCTTTACGTGTA