Homologs in group_2462

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00135 FBDBKF_00135 58.0 Morganella morganii S1 - DUF2570 domain-containing protein
EHELCC_01410 EHELCC_01410 58.0 Morganella morganii S2 - DUF2570 domain-containing protein
NLDBIP_02050 NLDBIP_02050 58.0 Morganella morganii S4 - DUF2570 domain-containing protein
LHKJJB_03565 LHKJJB_03565 58.0 Morganella morganii S3 - DUF2570 domain-containing protein
HKOGLL_00025 HKOGLL_00025 58.0 Morganella morganii S5 - DUF2570 domain-containing protein

Distribution of the homologs in the orthogroup group_2462

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2462

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06165
Feature type CDS
Gene -
Product hypothetical protein
Location 1299677 - 1300054 (strand: -1)
Length 378 (nucleotides) / 125 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2462
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Protein Sequence

MSTATKIWLGICGTLAIGLLLMLHLYGGLKDNYQLLSEKHSRLTTVNNITIAAVAVNHRVSLDNINAKQVEGTEHVKVKTVIKTVFKDSECAAIPVPADAVSELQKYAAGIRARASGFDTAKPDR

Flanking regions ( +/- flanking 50bp)

TTGCCGATTGAGACACGGTTCATTGATGCGCCTCATATCGAAATACCGGCATGAGTACCGCGACAAAGATATGGCTCGGTATTTGCGGAACACTGGCTATCGGCTTGCTGCTGATGCTACACCTGTACGGCGGGCTGAAAGATAATTATCAGCTGTTGTCTGAAAAACACAGTCGCCTGACCACTGTTAATAACATCACCATAGCGGCAGTCGCAGTCAATCACCGCGTATCACTCGACAACATCAACGCCAAACAGGTAGAGGGTACTGAGCATGTCAAAGTTAAGACTGTTATCAAAACGGTTTTCAAAGACAGCGAATGCGCTGCTATTCCTGTGCCCGCTGATGCTGTTAGTGAGTTGCAAAAGTACGCCGCCGGAATACGTGCCCGCGCCAGTGGTTTCGATACCGCCAAACCTGACCGCTGATTGCGAACAGATAGTTATACCGGATGATCTGACGTTCGGTGGCGCTGTTG