Homologs in group_4039

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4039

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4039

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39785 0.000356 43 24 5 159 4 xtmA PBSX phage terminase small subunit Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06145
Feature type CDS
Gene -
Product terminase small subunit
Location 1298083 - 1298715 (strand: -1)
Length 633 (nucleotides) / 210 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4039
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF03592 Terminase small subunit

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3728 Mobilome: prophages, transposons (X) X Phage terminase, small subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07474 phage terminase small subunit - -

Protein Sequence

MAQKKPTLTDEQRVLFDALTKQQQQFALGILKGLNQTDAYKQAGYKVKTDAAARSQSSRMLTFANVKSFLSAMSTSALSDAVMTRQEALERLSAIGRASVSEMVEFSEHDMGKDDDGNQVIQAVWRFKDSALQNPQALSAISELTAGKDGIKLKLHDPKAAIKQIVDMQGWEAPKKLDHTSTDGTMTPTGIDLSHLSVDQLLQLREKSRK

Flanking regions ( +/- flanking 50bp)

ATCCTAACAGCGGCGGGCACATTCAGGCGTTTACGATTTAAGGAAAAGGTATGGCACAAAAGAAACCAACGCTCACTGATGAGCAAAGAGTTCTTTTTGATGCCCTGACGAAACAGCAACAGCAATTCGCGTTAGGCATCCTGAAAGGGCTGAATCAGACCGATGCCTACAAACAGGCTGGCTACAAAGTGAAAACCGATGCGGCAGCAAGATCGCAATCAAGCCGAATGCTAACATTTGCTAACGTTAAATCGTTTCTCTCCGCAATGAGCACATCCGCTCTCTCGGATGCCGTTATGACCCGTCAGGAAGCCTTGGAGCGACTATCTGCAATCGGACGTGCGTCAGTATCAGAAATGGTTGAGTTCAGTGAGCACGACATGGGGAAGGATGACGACGGCAATCAGGTTATACAAGCCGTCTGGCGATTCAAAGACTCGGCATTGCAAAACCCACAAGCGCTGTCCGCGATATCTGAACTGACCGCTGGTAAAGACGGCATCAAGTTAAAACTGCACGACCCGAAAGCCGCGATAAAACAAATCGTGGATATGCAAGGGTGGGAAGCGCCGAAGAAACTGGATCACACGTCAACAGATGGCACGATGACCCCGACCGGAATTGACCTTAGCCACCTGAGTGTTGATCAGCTTTTGCAACTGAGAGAAAAATCCAGAAAATAGCCTCTCTTTAACATAATGACCGTTACCCGAATAAGCGAAATCAGGTTCAT