Homologs in group_3770

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12800 FBDBKF_12800 84.3 Morganella morganii S1 - Terminase large subunit gp17-like C-terminal domain-containing protein

Distribution of the homologs in the orthogroup group_3770

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3770

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9P9T5 7.18e-09 60 25 9 270 4 XF_1569 Uncharacterized protein XF_1569/XF_1674 Xylella fastidiosa (strain 9a5c)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06140
Feature type CDS
Gene terL
Product phage terminase large subunit
Location 1296476 - 1297882 (strand: -1)
Length 1407 (nucleotides) / 468 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3770
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF03237 Terminase large subunit, T4likevirus-type, N-terminal
PF17289 Terminase RNaseH-like domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5410 Function unknown (S) S Uncharacterized conserved protein

Protein Sequence

MDIDIDLFDEEVKREIARRSLHEFIQYINPEYITSHFSETVCDALDRFIVRMINGERPVIILGAPPQHGKSDIVSRYLPAYIFGKYADLRIAGLSYGKDLASDMNRDVQRIMMGEEYAALFPASCLNAKRVVTIEVEAKRNSETFEIIGRKGTYISQGVGGPLTGKKVDLGIIDDPIKNAKEALSPTTKQSVWNWYVSTFKTRLSKNSGEIIMATRWATDDLSGRVIENNARAEVLEFAAINEQGEALVPELHPLDKLLETKAILGDYFWSAMYQQKPKPGDGQIFHEEFARYYLLKDLPESFDEVIHSWDMTFKDSDGTDYVVGQVWGKKGANAYLLHQIRKRMSFTETLKAVKLLVEKFPQARRKLVEDKANGPAVIDTLKSTVSGLVPIEPDGSKIARAHACTAEWEAGNVWLPHKQIEPWITETVEEITTFPFAGHDDTVDAMTQALRYLYQKKGGGFFSRKRT

Flanking regions ( +/- flanking 50bp)

CATGATGATTTGAGGCTGAAAAGTCTGTTTCTGCAAATTTAGGTGATGTAATGGATATCGATATCGACTTGTTTGATGAGGAAGTCAAAAGGGAGATAGCGCGGCGTAGTCTGCATGAATTTATCCAGTACATTAACCCGGAATATATCACCAGTCACTTTTCAGAAACGGTCTGTGATGCCTTAGACCGGTTTATCGTCAGGATGATAAACGGTGAGCGTCCGGTGATTATCCTTGGTGCTCCGCCTCAGCACGGTAAGTCAGATATCGTGTCCCGCTATCTCCCCGCGTACATCTTCGGGAAATATGCCGACCTGCGTATTGCTGGTCTGTCATACGGTAAAGATTTAGCCTCGGACATGAACCGTGATGTACAGCGGATCATGATGGGTGAGGAATATGCAGCACTATTTCCGGCATCGTGCCTGAATGCAAAGCGCGTTGTTACCATCGAAGTGGAAGCAAAGCGCAACTCTGAAACGTTCGAGATTATCGGGCGCAAGGGTACCTATATCAGCCAGGGCGTAGGTGGTCCGTTAACCGGTAAAAAGGTTGATCTCGGGATTATTGATGACCCGATTAAAAACGCCAAAGAAGCACTCAGCCCGACAACCAAGCAATCCGTCTGGAACTGGTATGTTTCCACGTTTAAAACGCGTCTGTCGAAGAACAGCGGCGAAATCATCATGGCGACCCGTTGGGCTACTGATGATCTGTCCGGTCGTGTAATTGAAAATAACGCCCGCGCCGAAGTCCTGGAGTTTGCCGCTATCAACGAACAGGGTGAGGCGCTTGTCCCGGAGTTGCATCCGCTGGACAAACTGCTCGAAACAAAAGCTATTCTCGGCGATTACTTCTGGTCCGCCATGTACCAGCAGAAACCGAAACCGGGAGACGGGCAGATATTCCATGAAGAATTCGCCCGGTACTATCTGCTGAAAGATCTGCCTGAGTCCTTTGATGAAGTCATTCACAGCTGGGATATGACATTTAAGGACAGTGACGGCACGGACTACGTTGTCGGTCAGGTCTGGGGCAAGAAGGGCGCAAATGCCTATCTGCTGCATCAGATCCGCAAGCGCATGAGTTTTACCGAAACACTGAAAGCCGTGAAATTACTGGTGGAGAAATTTCCGCAGGCACGACGCAAGTTGGTCGAGGATAAAGCCAATGGTCCGGCGGTGATTGACACACTGAAATCAACTGTTTCCGGTCTGGTACCGATTGAGCCGGACGGCAGTAAAATCGCCCGCGCTCACGCCTGTACCGCAGAATGGGAAGCCGGTAACGTCTGGCTGCCTCACAAGCAAATTGAGCCGTGGATAACTGAGACGGTGGAAGAAATCACAACATTCCCGTTTGCCGGGCACGATGACACGGTTGATGCCATGACACAGGCATTACGTTATCTGTACCAGAAAAAAGGCGGCGGATTCTTTTCACGCAAGAGGACATAACATGTGGCCGTTCAGAAAGCGGAAAACAGCAGTGGTTGCCGCACCTAAGC