Homologs in group_2240

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17150 FBDBKF_17150 94.4 Morganella morganii S1 azlD AzlD domain-containing protein
EHELCC_01740 EHELCC_01740 94.4 Morganella morganii S2 azlD AzlD domain-containing protein
NLDBIP_01720 NLDBIP_01720 94.4 Morganella morganii S4 azlD AzlD domain-containing protein
LHKJJB_00315 LHKJJB_00315 94.4 Morganella morganii S3 azlD AzlD domain-containing protein
HKOGLL_00355 HKOGLL_00355 94.4 Morganella morganii S5 azlD AzlD domain-containing protein
PMI_RS08310 PMI_RS08310 56.5 Proteus mirabilis HI4320 - AzlD domain-containing protein

Distribution of the homologs in the orthogroup group_2240

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2240

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05905
Feature type CDS
Gene -
Product AzlD domain-containing protein
Location 1258871 - 1259197 (strand: -1)
Length 327 (nucleotides) / 108 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2240
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF05437 Branched-chain amino acid transport protein (AzlD)

Protein Sequence

MPDTLSILTGIALLAVGTYVMRASGALLSGRFSVSSHVKNLLSMGAIVILFAVAVTMTIFSGQELSDWPKIAGVAVAGLLTWYKKPFLLIVLAAAVVTALLRYLLSLW

Flanking regions ( +/- flanking 50bp)

CCGGTACTGTTATCACTGCTGGGGCTGGTTGTCAGTCTGGGGAGAGTATAATGCCGGATACATTATCAATATTGACCGGCATTGCGCTGCTGGCCGTCGGAACCTATGTTATGCGCGCATCCGGTGCGTTGCTCAGCGGACGTTTTTCTGTGTCATCACATGTGAAAAACCTGCTGTCTATGGGGGCGATTGTGATTTTGTTCGCGGTAGCCGTCACCATGACTATTTTCAGCGGACAGGAATTGTCGGACTGGCCTAAAATTGCCGGAGTGGCAGTGGCAGGGCTTCTGACATGGTATAAAAAACCCTTTCTGCTGATTGTTCTGGCAGCCGCCGTTGTCACTGCGCTGTTGCGTTATCTGCTGTCACTGTGGTGAGGATTTTCCCCTGTTACCGGCCGGTAACAGGGAACGCGCCACTGTACATA