Homologs in group_941

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05120 FBDBKF_05120 86.7 Morganella morganii S1 - DUF2498 domain-containing protein
EHELCC_12470 EHELCC_12470 86.7 Morganella morganii S2 - DUF2498 domain-containing protein
NLDBIP_12810 NLDBIP_12810 86.7 Morganella morganii S4 - DUF2498 domain-containing protein
LHKJJB_12670 LHKJJB_12670 86.7 Morganella morganii S3 - DUF2498 domain-containing protein
HKOGLL_11285 HKOGLL_11285 86.7 Morganella morganii S5 - DUF2498 domain-containing protein
PMI_RS06440 PMI_RS06440 65.9 Proteus mirabilis HI4320 - YciN family protein

Distribution of the homologs in the orthogroup group_941

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_941

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AB64 1.08e-31 108 63 0 82 1 yciN Protein YciN Shigella flexneri
P0AB61 1.08e-31 108 63 0 82 1 yciN Protein YciN Escherichia coli (strain K12)
P0AB62 1.08e-31 108 63 0 82 4 yciN Protein YciN Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AB63 1.08e-31 108 63 0 82 4 yciN Protein YciN Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05575
Feature type CDS
Gene -
Product DUF2498 family protein
Location 1187056 - 1187307 (strand: 1)
Length 252 (nucleotides) / 83 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_941
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF10692 Protein of unknown function (DUF2498)

Protein Sequence

MPKETIAAGKAELLEKANKIIQEHDDFIEGMIADDVEQKCGVLVFKGEYFLDDQGLPTLKSAAVFNMFKHLAHTMSEQYHLVG

Flanking regions ( +/- flanking 50bp)

CCTGATAAATAGTGATGCGCAACAAAATATTTTTTAAAGGAGTTCACAAAATGCCAAAAGAAACCATCGCCGCCGGTAAAGCCGAACTGTTAGAAAAAGCGAATAAAATCATACAGGAACATGACGACTTCATTGAAGGAATGATCGCTGATGATGTTGAACAAAAATGTGGCGTACTGGTTTTTAAAGGTGAATACTTTTTAGACGACCAGGGCCTGCCGACACTCAAAAGTGCCGCAGTATTTAATATGTTTAAACATCTCGCACATACTATGTCAGAGCAATATCATTTAGTCGGTTGACAGATGATATCCGGTATAAACTGACAAAAACAATAACGGCAGCCTGAGCT