Homologs in group_4033

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4033

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4033

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O86509 6.18e-63 207 38 9 341 3 aguA Putative agmatine deiminase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q82JP0 3.49e-61 202 37 9 343 3 aguA Putative agmatine deiminase Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
Q5ZZK4 8.41e-61 201 35 4 334 3 aguA Putative agmatine deiminase Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Q5X0L4 1.01e-60 201 35 4 334 3 aguA Putative agmatine deiminase Legionella pneumophila (strain Lens)
Q5X986 6.77e-59 196 34 4 334 3 aguA Putative agmatine deiminase Legionella pneumophila (strain Paris)
C1CK08 5.75e-52 179 32 8 355 3 aguA Putative agmatine deiminase Streptococcus pneumoniae (strain P1031)
C1CDR9 6.07e-51 176 32 8 355 3 aguA Putative agmatine deiminase Streptococcus pneumoniae (strain JJA)
Q97RA4 6.07e-51 176 32 8 355 3 aguA Putative agmatine deiminase Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
C1C6Q3 6.07e-51 176 32 8 355 3 aguA Putative agmatine deiminase Streptococcus pneumoniae (strain 70585)
C1CRX2 2.59e-50 174 32 8 355 3 aguA Putative agmatine deiminase Streptococcus pneumoniae (strain Taiwan19F-14)
A6VVD9 4.47e-50 174 31 6 359 3 aguA Putative agmatine deiminase Marinomonas sp. (strain MWYL1)
B1IB89 8.78e-50 173 31 8 355 3 aguA Putative agmatine deiminase Streptococcus pneumoniae (strain Hungary19A-6)
B2IP79 2.01e-49 172 31 8 355 3 aguA Putative agmatine deiminase Streptococcus pneumoniae (strain CGSP14)
B8ZP26 2.01e-49 172 31 8 355 3 aguA Putative agmatine deiminase Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1)
Q8DQ68 2.78e-49 172 31 8 355 3 aguA Putative agmatine deiminase Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Q04L01 2.78e-49 172 31 8 355 3 aguA Putative agmatine deiminase Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)
Q8GWW7 6.94e-49 171 29 8 361 1 AIH Agmatine deiminase Arabidopsis thaliana
A4XP44 5.91e-48 169 30 8 356 3 aguA Agmatine deiminase Pseudomonas mendocina (strain ymp)
Q5KR05 2.42e-47 167 30 7 358 3 aguA Putative agmatine deiminase Selenomonas ruminantium
Q725C6 3.04e-47 167 29 7 354 3 aguA1 Putative agmatine deiminase 1 Listeria monocytogenes serotype 4b (strain F2365)
Q8YAS5 4.82e-47 166 29 7 354 3 aguA1 Putative agmatine deiminase 1 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
A6UY93 5.09e-47 166 31 9 356 3 aguA Agmatine deiminase Pseudomonas aeruginosa (strain PA7)
C3K5U8 5.31e-47 166 31 11 359 3 aguA Agmatine deiminase Pseudomonas fluorescens (strain SBW25)
Q6CZ80 1.84e-46 164 30 5 351 3 aguA Putative agmatine deiminase Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
A4VFL7 4.76e-46 164 31 7 354 3 aguA Agmatine deiminase Stutzerimonas stutzeri (strain A1501)
Q88R68 1.28e-45 162 32 11 358 3 aguA Agmatine deiminase Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q8RPX2 1.69e-45 162 30 9 355 3 aguA Putative agmatine deiminase Latilactobacillus sakei subsp. sakei (strain 23K)
Q48Q55 3.87e-45 161 31 12 359 3 aguA Agmatine deiminase Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
Q87UB2 4.39e-45 161 30 9 356 3 aguA Agmatine deiminase Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
G7JT50 4.43e-45 161 29 7 364 1 AIH Agmatine deiminase Medicago truncatula
A5VX45 5.96e-45 160 31 10 358 3 aguA Agmatine deiminase Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1)
Q8YAS3 8.62e-45 160 29 6 358 3 aguA2 Putative agmatine deiminase 2 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q725C4 9.28e-45 160 29 6 358 3 aguA2 Putative agmatine deiminase 2 Listeria monocytogenes serotype 4b (strain F2365)
B0KI18 9.97e-45 160 31 11 358 3 aguA Agmatine deiminase Pseudomonas putida (strain GB-1)
Q4ZLL3 1.14e-44 160 31 13 362 3 aguA Agmatine deiminase Pseudomonas syringae pv. syringae (strain B728a)
Q2SRJ6 2.69e-44 159 30 9 354 3 aguA Putative agmatine deiminase Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154)
Q87NU5 1.44e-43 157 28 6 353 3 aguA Putative agmatine deiminase Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
B7V2K4 2.11e-42 154 31 8 354 3 aguA Agmatine deiminase Pseudomonas aeruginosa (strain LESB58)
Q666N7 2.24e-42 154 30 6 351 3 aguA Putative agmatine deiminase Yersinia pseudotuberculosis serotype I (strain IP32953)
Q8ZHG0 2.24e-42 154 30 6 351 3 aguA Putative agmatine deiminase Yersinia pestis
A7FEY8 2.24e-42 154 30 6 351 3 aguA Putative agmatine deiminase Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q02UC5 3.31e-42 153 30 8 354 3 aguA Agmatine deiminase Pseudomonas aeruginosa (strain UCBPP-PA14)
Q9I6J9 7.49e-42 152 31 8 354 1 aguA Agmatine deiminase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q4KJX9 2.18e-41 151 29 8 354 3 aguA Agmatine deiminase Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Q0HF12 8.75e-41 150 29 8 357 3 aguA Putative agmatine deiminase Shewanella sp. (strain MR-4)
Q6MSR8 9.69e-41 149 29 9 354 3 aguA Putative agmatine deiminase Mycoplasma mycoides subsp. mycoides SC (strain CCUG 32753 / NCTC 10114 / PG1)
A6WR31 9.72e-41 149 29 8 357 3 aguA Putative agmatine deiminase Shewanella baltica (strain OS185)
A0L0W9 1.24e-40 149 30 8 357 3 aguA Putative agmatine deiminase Shewanella sp. (strain ANA-3)
Q0HYZ3 1.29e-40 149 29 8 357 3 aguA Putative agmatine deiminase Shewanella sp. (strain MR-7)
A3D798 5.38e-40 147 29 8 357 3 aguA Putative agmatine deiminase Shewanella baltica (strain OS155 / ATCC BAA-1091)
Q9CEY6 5.85e-40 147 29 7 352 3 aguA Putative agmatine deiminase Lactococcus lactis subsp. lactis (strain IL1403)
A9KYH3 8.08e-40 147 29 8 357 3 aguA Putative agmatine deiminase Shewanella baltica (strain OS195)
Q837U5 2.13e-39 146 27 7 352 1 aguA Putative agmatine deiminase Enterococcus faecalis (strain ATCC 700802 / V583)
Q8DW17 3.01e-39 145 29 12 361 1 aguA Putative agmatine deiminase Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
A1RHF0 3.94e-39 145 29 8 357 3 aguA Putative agmatine deiminase Shewanella sp. (strain W3-18-1)
A4Y946 3.94e-39 145 29 8 357 3 aguA Putative agmatine deiminase Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
B8E8S8 5.01e-39 145 29 8 357 3 aguA Putative agmatine deiminase Shewanella baltica (strain OS223)
Q8EIF2 9.65e-39 144 29 8 357 3 aguA Putative agmatine deiminase Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q6LG16 2.88e-38 143 28 6 353 3 aguA Putative agmatine deiminase Photobacterium profundum (strain SS9)
Q083U9 8.13e-38 142 29 8 357 3 aguA Putative agmatine deiminase Shewanella frigidimarina (strain NCIMB 400)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05340
Feature type CDS
Gene -
Product agmatine deiminase family protein
Location 1132324 - 1133385 (strand: 1)
Length 1062 (nucleotides) / 353 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4033
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF04371 Porphyromonas-type peptidyl-arginine deiminase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2957 Amino acid transport and metabolism (E) E Agmatine/peptidylarginine deiminase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K10536 agmatine deiminase [EC:3.5.3.12] Arginine and proline metabolism
Metabolic pathways		 -

Protein Sequence

MFIYPSEHQPHKATWLAFGAHPRIWSAKLAAGVCRDQANIAQAIARFEPVNLLVTKENRAIAQQLLGDTVTYIDCPLDDIWLRDSGANFVYDTLTQRPAAVSFNFNGWGGKQTAKHDANIAAVMAQYTGMPLHISPLTLEGGAVEVNGYGTGIFTRSCILNDNRNPGFSRQRTEQLLQQTLGLNTIIWLNGIRDHDITDAHVDFYARFINEKSLIIPMENDPGSYEYEVTRDHAAALNTLRQHTNLIDNIHVLNNPSQTRVNRDKHPDFAAGYINYYPCNGGIILPEFGDKTADAQARSLLESLFPQRTVVQINIDNIASGGGGIHCVTMQQPDFSSFHTDGQHNDRDHLAHR

Flanking regions ( +/- flanking 50bp)

TATTTACGGCTGGTATTACATGTCGTTACCATTGAGATAATGAGCTGACTATGTTTATTTATCCTTCAGAACATCAGCCCCACAAAGCCACCTGGCTGGCATTCGGGGCTCATCCACGCATCTGGTCTGCAAAACTTGCCGCAGGAGTCTGTCGTGATCAGGCAAATATTGCACAGGCTATTGCCCGCTTTGAACCGGTTAATCTGCTGGTAACAAAAGAGAACAGAGCCATTGCACAGCAGTTACTCGGTGACACTGTCACTTACATTGACTGTCCGCTGGATGATATCTGGCTGCGCGACAGCGGTGCCAATTTTGTTTATGACACCCTGACACAGCGCCCCGCCGCAGTCAGTTTTAATTTTAACGGCTGGGGTGGAAAACAAACAGCAAAGCACGATGCAAACATTGCAGCGGTTATGGCACAATACACCGGTATGCCTTTGCATATCAGCCCGCTGACCCTGGAAGGTGGCGCGGTTGAAGTCAATGGCTATGGTACCGGTATTTTTACCCGCAGTTGTATTCTTAATGATAACCGTAACCCCGGATTCAGCCGTCAGCGGACAGAGCAGTTATTACAGCAAACCCTTGGTCTGAATACAATTATCTGGCTTAATGGTATCCGCGACCATGATATTACCGATGCCCATGTGGATTTCTACGCGCGGTTTATCAATGAAAAATCGTTAATTATTCCGATGGAAAATGACCCCGGTTCCTATGAGTACGAGGTCACGCGGGATCATGCCGCAGCCCTGAATACTCTGCGTCAGCATACTAATCTGATTGATAATATTCATGTTCTGAATAATCCGTCACAGACAAGGGTTAACCGGGACAAGCACCCGGATTTTGCCGCCGGATACATTAATTACTACCCGTGTAACGGCGGGATTATCCTGCCGGAATTCGGCGATAAAACCGCCGATGCGCAGGCGCGATCCCTGCTTGAATCCCTGTTCCCACAGCGCACCGTTGTTCAGATAAATATTGATAATATTGCGTCCGGCGGTGGCGGTATCCATTGTGTCACCATGCAGCAGCCGGATTTTTCTTCTTTTCATACAGACGGACAACACAATGACCGCGATCACCTGGCACACCGCTGAATTTAATACATTATCACCGCTGACACTCTACCGCCTTCTTGCTCTGCGCA