Homologs in group_2560

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02665 FBDBKF_02665 90.4 Morganella morganii S1 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
EHELCC_03135 EHELCC_03135 90.4 Morganella morganii S2 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
NLDBIP_00325 NLDBIP_00325 90.4 Morganella morganii S4 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
LHKJJB_01710 LHKJJB_01710 90.4 Morganella morganii S3 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
HKOGLL_01750 HKOGLL_01750 90.4 Morganella morganii S5 rhaT Permease of the drug/metabolite transporter (DMT) superfamily

Distribution of the homologs in the orthogroup group_2560

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2560

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ABT8 6.61e-159 447 75 2 301 1 yijE Probable cystine transporter YijE Escherichia coli (strain K12)
P0ABT9 6.61e-159 447 75 2 301 3 yijE Probable cystine transporter YijE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
O34416 2.39e-27 110 25 7 266 3 yoaV Uncharacterized transporter YoaV Bacillus subtilis (strain 168)
O29740 2.9e-06 51 24 7 279 3 AF_0510 Uncharacterized transporter AF_0510 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q56072 3.24e-05 48 26 5 199 3 eamA Probable amino-acid metabolite efflux pump Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O29973 7.42e-05 47 22 7 254 3 AF_0266 Uncharacterized transporter AF_0266 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
P31125 0.000343 45 25 5 199 1 eamA Probable amino-acid metabolite efflux pump Escherichia coli (strain K12)
P0AA70 0.001 43 22 7 211 1 yedA Uncharacterized inner membrane transporter YedA Escherichia coli (strain K12)
P0AA71 0.001 43 22 7 211 3 yedA Uncharacterized inner membrane transporter YedA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA72 0.001 43 22 7 211 3 yedA Uncharacterized inner membrane transporter YedA Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05165
Feature type CDS
Gene -
Product DMT family transporter
Location 1100726 - 1101631 (strand: -1)
Length 906 (nucleotides) / 301 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2560
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00892 EamA-like transporter family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0697 Carbohydrate transport and metabolism (G)
Amino acid transport and metabolism (E)
General function prediction only (R)		 GER Permease of the drug/metabolite transporter (DMT) superfamily

Protein Sequence

MALREKDNAIAISGLVILTLIWSYSWIAMKQVTRYVDAFDFTAMRCVFSAIMLLLVLYIRSRVTGRKIRFTPFSYTLGIAVLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIMAAVFLGERMRRLQYAAIAVAAAGLVCVIQPWSLDFSSMKSAFLAISSGISWGASAIVAKKLYRRYPQVDLLSLTTWQMVYAAVVMTIVALLVPQREIDWQPYVFWALSYSAILATAVAWSLWLFVLRKLPAGIASLSTLAVPVCGVLFSWWLLGEEPGRTEATGIIMIVLALAVISIKLPKKSA

Flanking regions ( +/- flanking 50bp)

CGCACGCGGTATATGGCATTCCATCATCGTGCAGTGGTTTGCAGAATATTATGGCTTTACGAGAGAAAGACAATGCCATCGCCATTAGCGGGCTGGTTATTTTAACACTGATCTGGAGTTACAGTTGGATCGCCATGAAACAGGTCACGCGCTACGTTGATGCGTTTGATTTTACGGCGATGCGCTGTGTATTCAGCGCCATTATGCTGCTGCTGGTGCTCTATATCCGTTCGCGTGTGACAGGGCGCAAAATCCGGTTTACTCCGTTTAGTTACACGCTGGGAATTGCTGTGCTGCAAACCTGCGGCATGGTCGGGCTGGCGCAGTGGGCGCTGGTCAGCGGCGGTGCCGGAAAAGTGGCGATCCTCAGTTATACCATGCCGTTCTGGGTAGTCATTATGGCGGCAGTTTTTCTGGGCGAGCGGATGCGCCGCCTGCAATATGCGGCTATTGCAGTGGCTGCCGCCGGGCTTGTGTGTGTCATCCAGCCCTGGTCCCTTGATTTTTCATCAATGAAAAGTGCCTTTCTGGCGATTTCCTCCGGGATAAGCTGGGGGGCGAGCGCTATTGTGGCGAAAAAATTATACCGTCGCTATCCGCAAGTGGATTTGCTCTCTCTGACTACCTGGCAGATGGTCTATGCCGCCGTTGTTATGACAATTGTGGCTTTACTGGTTCCGCAGCGGGAAATTGACTGGCAGCCTTATGTGTTCTGGGCACTGAGTTACAGTGCAATACTGGCGACCGCTGTTGCCTGGAGCTTATGGTTATTTGTTCTGCGGAAATTGCCTGCCGGTATCGCCAGCCTGAGTACATTAGCCGTGCCGGTGTGTGGTGTTCTGTTTTCCTGGTGGTTATTGGGTGAGGAACCGGGACGGACAGAGGCGACAGGAATTATCATGATTGTGCTGGCACTGGCTGTGATAAGCATTAAATTACCCAAAAAATCAGCATAAATACTTATACAAAACGTCATTCAAGATGCAGGAAGGCGGCAAGGAGCAGA