Homologs in group_3728

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2 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS01005 PMI_RS01005 29.9 Proteus mirabilis HI4320 - DUF4123 domain-containing protein
PMI_RS06415 PMI_RS06415 35.2 Proteus mirabilis HI4320 - DUF4123 domain-containing protein

Distribution of the homologs in the orthogroup group_3728

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3728

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05130
Feature type CDS
Gene -
Product DUF4123 domain-containing protein
Location 1094193 - 1094999 (strand: -1)
Length 807 (nucleotides) / 268 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3728
Orthogroup size 3
N. genomes 2

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Genomic region

Domains

PF13503 Domain of unknown function (DUF4123)

Protein Sequence

MAGLNTTQWLTETDPAPIYLMVNTQAKPNPVEILYANDWIEDAFRIYDSTPLAHITEQSPWLILLKQSSYPALGRLMDSGVFSDPSWGWAYRSSQSLQENLDHWRRRQLVTLKGNTVILRLADSRVAGILFPAMNKEDWRILMTPVARVLVTTPELKAFHSLATHCDLPAPEIQHLPFEVKPHLIRAWQQSTQALIFYADNIACELWENQPEEALILDTPEGELMHRLDIWFRQQLSLMTDINFLTYEDFLRHAKHKGWMPSTDGGMM

Flanking regions ( +/- flanking 50bp)

GGTTGCGGCTCAGACAGCAGGAAGCTGGATTATAAAATCAGGAGAATAAAATGGCCGGACTGAACACGACACAATGGCTGACAGAAACCGATCCTGCACCTATATATCTGATGGTGAATACACAAGCAAAACCGAATCCGGTTGAAATACTGTATGCAAATGACTGGATTGAGGATGCATTCCGAATTTATGACAGCACCCCACTGGCACATATCACAGAGCAAAGCCCCTGGCTTATCCTGTTGAAACAATCATCATATCCGGCACTCGGAAGATTAATGGACAGCGGTGTTTTCAGTGATCCGTCATGGGGCTGGGCATACCGCAGCAGTCAGTCATTACAGGAAAATCTCGATCACTGGCGTCGCCGTCAGTTAGTTACCCTGAAAGGAAATACCGTTATTCTTCGCCTCGCTGACAGCCGGGTCGCGGGTATTTTATTTCCGGCAATGAATAAAGAGGACTGGCGGATACTGATGACACCGGTAGCGCGGGTATTAGTTACCACACCAGAGCTGAAAGCATTTCACTCACTTGCCACTCATTGCGACTTACCTGCACCGGAAATACAACATCTGCCGTTTGAGGTAAAACCACATCTGATCAGGGCATGGCAACAATCGACACAGGCACTGATATTTTATGCGGATAATATCGCCTGTGAGCTGTGGGAAAACCAGCCGGAAGAAGCCCTTATACTGGATACCCCGGAAGGTGAGTTAATGCATCGTCTGGATATTTGGTTTCGGCAGCAGTTATCACTTATGACCGATATTAATTTTCTCACTTATGAGGATTTTCTCCGCCATGCAAAACATAAGGGATGGATGCCGTCAACTGACGGAGGGATGATGTGAGTGAAATAAGGGATTGTATTGATTGTGATAATTACCGTTACTGGCTGGAA