Homologs in group_2553

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02565 FBDBKF_02565 85.5 Morganella morganii S1 - HAD phosphoserine phosphatase-like hydrolase, family IB
EHELCC_03035 EHELCC_03035 85.5 Morganella morganii S2 - HAD phosphoserine phosphatase-like hydrolase, family IB
NLDBIP_00425 NLDBIP_00425 85.5 Morganella morganii S4 - HAD phosphoserine phosphatase-like hydrolase, family IB
LHKJJB_01610 LHKJJB_01610 85.5 Morganella morganii S3 - HAD phosphoserine phosphatase-like hydrolase, family IB
HKOGLL_01650 HKOGLL_01650 85.5 Morganella morganii S5 - HAD phosphoserine phosphatase-like hydrolase, family IB

Distribution of the homologs in the orthogroup group_2553

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2553

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O51040 5.12e-17 82 27 12 279 4 BB_0007 Uncharacterized protein BB_0007 Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04995
Feature type CDS
Gene -
Product HAD family hydrolase
Location 1064150 - 1064980 (strand: -1)
Length 831 (nucleotides) / 276 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2553
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF12710 haloacid dehalogenase-like hydrolase

Protein Sequence

MTEKLKCALIYDFDGTLAEGDCPEHGLMPALGVSDFPAFWREVKAHAKEDDGDEILSYMGTLAAKANATHSDELSVENLMKHGKSIPLFPGVNAWFSRINKWAQEHNLLLEHYILSSGLDAMIRGTAIGNEFRDIYACKYHYSPDGKKALWPAQAINYTTKTQFLFRINKGIHNSWDNAAVNEFIEQEERDIQFRHMIYFGDGDTDIPAMKMIRFQGGFSLAVFDQKKWGNPETQQKVGKLIAEERANYVVPASYEEGSQLDVTVKGLLQLFSRKR

Flanking regions ( +/- flanking 50bp)

TTTGCCGACAAAGTCCGTGAAACTGTGCTGGCATCAGGGGAAGAGGTGAAATGACCGAAAAATTAAAGTGCGCATTGATTTATGATTTTGACGGCACATTAGCCGAGGGTGATTGTCCGGAGCACGGATTAATGCCTGCGCTGGGTGTGAGTGACTTCCCGGCATTCTGGCGTGAAGTGAAAGCACACGCCAAAGAAGATGACGGCGATGAAATTCTGTCCTATATGGGAACGCTGGCGGCAAAGGCCAATGCAACACACTCAGATGAACTGAGTGTTGAAAACCTGATGAAACACGGGAAAAGCATCCCGTTATTTCCCGGTGTGAATGCCTGGTTTTCCCGGATTAATAAGTGGGCGCAGGAGCATAATTTACTGCTGGAGCACTATATTCTCTCCAGCGGGCTGGATGCCATGATCCGTGGCACAGCTATCGGCAACGAATTTCGTGATATCTACGCCTGTAAATATCACTATTCCCCGGACGGAAAAAAAGCCCTGTGGCCGGCTCAGGCAATCAATTACACCACCAAAACCCAGTTTTTATTCCGTATCAACAAAGGAATACATAATTCCTGGGATAACGCGGCGGTGAATGAGTTTATTGAGCAGGAAGAGCGCGACATCCAGTTTCGTCATATGATCTATTTCGGTGACGGGGATACAGATATTCCGGCGATGAAAATGATCCGTTTTCAGGGCGGTTTCTCGCTGGCGGTGTTTGATCAGAAAAAATGGGGCAATCCGGAGACTCAGCAGAAAGTCGGTAAATTAATCGCTGAAGAGCGGGCGAACTATGTGGTGCCTGCCAGCTATGAAGAGGGCAGCCAGTTGGATGTCACGGTAAAAGGATTATTGCAGTTGTTCAGCCGCAAGCGGTAACATTCAGTCCGCTACTTCCGGAAATAAGGCGGCGGATATTTAAAAAAACT