Homologs in group_2542

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02475 FBDBKF_02475 83.3 Morganella morganii S1 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
EHELCC_02945 EHELCC_02945 83.3 Morganella morganii S2 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
NLDBIP_00515 NLDBIP_00515 83.3 Morganella morganii S4 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
LHKJJB_01520 LHKJJB_01520 83.3 Morganella morganii S3 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
HKOGLL_01560 HKOGLL_01560 83.3 Morganella morganii S5 rhaT Permease of the drug/metabolite transporter (DMT) superfamily

Distribution of the homologs in the orthogroup group_2542

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2542

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P96668 2.77e-110 323 61 0 285 3 ydeK Uncharacterized transporter YdeK Bacillus subtilis (strain 168)
P37511 0.000173 46 22 7 257 3 yyaM Uncharacterized transporter YyaM Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04850
Feature type CDS
Gene -
Product DMT family transporter
Location 1031212 - 1032093 (strand: -1)
Length 882 (nucleotides) / 293 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2542
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00892 EamA-like transporter family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0697 Carbohydrate transport and metabolism (G)
Amino acid transport and metabolism (E)
General function prediction only (R)		 GER Permease of the drug/metabolite transporter (DMT) superfamily

Protein Sequence

MDNEIVATSHSARGWINGFIGVLIFSGSLPATKAGIIGFAPDFLTVSRAAIAGIFALIILLVMRQRLPAAKYIPSLLIVAAGVVVGFPLLTALALEHVSSAHSIVYLGLLPLATALFGVLRSSERPKPAFWFFSVLGSVFVMGFALFQGGESTLTGDIYMLAAVLLCGLGYAEGAALSRHIGSWQVICQALVISLPVMIILCIALWPETLRGIPAQAWGGLIYIALFSMLIGFFFWYRGLAEGGIAGVSQLQLLQPFFGLVLSALILNEAVSFVMIASTVGVIACVAGSKRFS

Flanking regions ( +/- flanking 50bp)

TATCAGTATTAGGCTCTGGTATCACAAGGTCTTATTAAGCGGAGTATGATATGGATAATGAAATAGTGGCAACTTCCCACTCAGCGCGTGGCTGGATCAACGGCTTTATTGGTGTCCTGATCTTTAGCGGCTCCCTGCCCGCAACAAAAGCCGGTATTATCGGGTTTGCACCTGATTTTCTGACAGTGTCACGGGCAGCAATTGCCGGGATTTTTGCACTGATAATTTTACTGGTCATGCGCCAACGCTTGCCGGCTGCAAAATATATCCCGTCATTACTGATAGTGGCGGCAGGCGTTGTTGTAGGTTTTCCGTTATTGACCGCTCTTGCCCTGGAGCATGTCAGTTCTGCTCATTCAATTGTCTATCTCGGATTATTACCTCTGGCGACTGCATTGTTTGGTGTTTTGCGCAGCAGTGAACGCCCGAAGCCTGCCTTTTGGTTTTTTTCAGTCCTGGGCAGTGTGTTTGTTATGGGATTTGCATTATTTCAGGGCGGTGAAAGTACACTGACCGGCGATATCTACATGTTGGCGGCAGTATTACTTTGCGGGCTCGGGTATGCGGAGGGCGCTGCCCTTTCCCGTCATATCGGTAGTTGGCAGGTGATTTGCCAGGCATTGGTTATTTCCCTGCCGGTGATGATCATTCTGTGTATTGCATTATGGCCGGAAACATTACGCGGTATACCGGCACAGGCATGGGGCGGATTAATCTATATTGCGTTATTCAGTATGCTGATTGGTTTTTTCTTTTGGTATCGCGGGCTGGCTGAAGGCGGTATTGCTGGCGTCAGTCAGCTACAGCTGTTACAGCCGTTCTTTGGATTGGTCCTTTCTGCTTTGATACTTAATGAGGCGGTCAGCTTTGTTATGATTGCATCAACGGTTGGCGTTATTGCCTGCGTGGCAGGTTCAAAGCGATTTTCCTGATAAGTTATTATGAAGGTGATTTATTTTTTGACTGAATACTAAAAACAATG