Homologs in group_2541

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02470 FBDBKF_02470 64.6 Morganella morganii S1 - MFS transporter
EHELCC_02940 EHELCC_02940 64.6 Morganella morganii S2 - MFS transporter
NLDBIP_00520 NLDBIP_00520 64.6 Morganella morganii S4 - MFS transporter
LHKJJB_01515 LHKJJB_01515 64.6 Morganella morganii S3 - MFS transporter
HKOGLL_01555 HKOGLL_01555 64.6 Morganella morganii S5 - MFS transporter

Distribution of the homologs in the orthogroup group_2541

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2541

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04845
Feature type CDS
Gene -
Product MFS transporter
Location 1030062 - 1031204 (strand: 1)
Length 1143 (nucleotides) / 380 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2541
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF07690 Major Facilitator Superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2814 Carbohydrate transport and metabolism (G) G Predicted arabinose efflux permease AraJ, MFS family

Protein Sequence

MGIYRAVFEKNSRAINLCFLLNAMGSGLLMPLALLYLVGTHLSAKEILYLGTVKFWSYSLAYFIVIPSATQFDSKKVIIFSLIFKLISLSLLFYDQSFYLCLIVMLTNGIATSFFSVASKYYIKATAKNMSESFSVRMTLNNTGAAISPMLISAFVYFSMTFTTALLTLILLFIIGVLFSTGLKICPGKPRQPHGTITISDLINKDVAVISVISILFSMLYYTFEVIVPLELVQSDNKSLIGPVMLFNTGVIIIGQIPVYRYLTEKCGIVNSILIATGLCILLFIPWFFQLTGLPGLLLIVIGVTFLEMFYGAGIDTLITSVDSDRNIAILDGISGVALAIGAAVAAVIYGDSVMFMPLVITLFMLTIVFSIQSKNKSPS

Flanking regions ( +/- flanking 50bp)

ACCGGAAGGGCGATTTTTTCTGAAATATGTCAGCGCTGGAACCTTAGCTGATGGGAATATACCGTGCCGTTTTTGAAAAAAACAGCCGGGCTATTAACCTCTGTTTTTTACTTAATGCGATGGGTTCCGGATTACTGATGCCTCTGGCGTTGTTATACCTTGTCGGTACACATCTCAGCGCTAAAGAAATACTTTATTTAGGGACTGTAAAGTTTTGGTCATATTCACTGGCCTATTTTATAGTGATCCCGTCGGCAACACAGTTTGACAGTAAAAAAGTCATTATTTTTTCACTGATATTTAAATTAATATCACTTTCACTGTTATTTTATGATCAGTCATTTTATCTTTGCCTGATTGTCATGCTGACAAACGGCATTGCTACATCTTTTTTTTCGGTTGCATCAAAATATTATATTAAAGCCACAGCGAAAAATATGAGTGAAAGCTTTTCTGTACGTATGACACTCAACAATACAGGTGCGGCAATTTCACCGATGCTGATCAGTGCATTTGTCTATTTTTCCATGACATTTACCACTGCACTCCTGACACTGATCTTATTATTTATCATCGGTGTTTTATTCTCAACCGGATTGAAAATTTGTCCCGGGAAACCACGTCAGCCACATGGTACCATTACTATTTCTGACCTGATAAATAAAGATGTCGCGGTTATTTCAGTTATCAGTATTCTTTTCTCTATGTTGTACTACACTTTTGAAGTCATTGTTCCGCTGGAGTTGGTGCAATCAGATAACAAATCGCTTATCGGACCGGTGATGTTATTCAACACCGGTGTGATAATTATCGGGCAGATCCCCGTATACCGATATCTCACGGAAAAGTGCGGCATAGTAAATTCGATACTGATAGCAACCGGGCTTTGTATTCTGCTGTTTATTCCCTGGTTTTTCCAGCTGACGGGTCTGCCGGGACTGCTGTTAATTGTTATTGGTGTGACATTTCTGGAAATGTTTTACGGCGCAGGCATTGATACACTAATTACATCAGTGGACAGCGACCGGAACATCGCCATACTGGATGGTATTTCCGGCGTAGCCCTTGCCATTGGTGCCGCTGTTGCGGCTGTTATTTATGGCGACTCTGTTATGTTTATGCCGCTGGTCATAACCCTGTTTATGTTAACCATTGTTTTTAGTATTCAGTCAAAAAATAAATCACCTTCATAATAACTTATCAGGAAAATCGCTTTGAACCTGCCACGCAGGCAATAACGCCA