Homologs in group_667

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02380 FBDBKF_02380 94.1 Morganella morganii S1 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
EHELCC_02850 EHELCC_02850 94.1 Morganella morganii S2 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
NLDBIP_00610 NLDBIP_00610 94.1 Morganella morganii S4 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
LHKJJB_01425 LHKJJB_01425 94.1 Morganella morganii S3 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
HKOGLL_01465 HKOGLL_01465 94.1 Morganella morganii S5 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
PMI_RS05790 PMI_RS05790 82.3 Proteus mirabilis HI4320 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha

Distribution of the homologs in the orthogroup group_667

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_667

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P07001 0.0 827 80 2 511 1 pntA NAD(P) transhydrogenase subunit alpha Escherichia coli (strain K12)
P43842 0.0 732 71 4 513 3 pntA NAD(P) transhydrogenase subunit alpha Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9ALA2 0.0 548 54 5 522 1 pntA NAD(P) transhydrogenase subunit alpha Cereibacter sphaeroides
P11024 1.04e-158 482 50 11 537 1 NNT NAD(P) transhydrogenase, mitochondrial Bos taurus
W5PFI3 1.12e-158 482 50 11 537 1 NNT NAD(P) transhydrogenase, mitochondrial Ovis aries
Q13423 1.28e-157 479 49 11 537 1 NNT NAD(P) transhydrogenase, mitochondrial Homo sapiens
Q61941 1.05e-156 477 49 10 534 1 Nnt NAD(P) transhydrogenase, mitochondrial Mus musculus
P0C186 1.54e-98 305 43 4 379 3 pntAA NAD(P) transhydrogenase subunit alpha part 1 Rhodospirillum rubrum
Q2RSB2 1.54e-98 305 43 4 379 1 pntAA NAD(P) transhydrogenase subunit alpha part 1 Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1)
P41077 1.39e-76 248 39 5 372 3 pntAA NAD(P) transhydrogenase subunit alpha part 1 Rickettsia prowazekii (strain Madrid E)
Q2YTD1 1.61e-37 144 33 6 299 3 ald2 Alanine dehydrogenase 2 Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q6GFZ8 1.99e-37 144 33 6 299 3 ald2 Alanine dehydrogenase 2 Staphylococcus aureus (strain MRSA252)
Q8NW54 2.12e-37 144 33 6 299 3 ald2 Alanine dehydrogenase 2 Staphylococcus aureus (strain MW2)
Q6G8L8 2.12e-37 144 33 6 299 3 ald2 Alanine dehydrogenase 2 Staphylococcus aureus (strain MSSA476)
Q5HF65 2.12e-37 144 33 6 299 3 ald2 Alanine dehydrogenase 2 Staphylococcus aureus (strain COL)
Q2FXL7 2.12e-37 144 33 6 299 3 ald2 Alanine dehydrogenase 2 Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FG29 2.12e-37 144 33 6 299 3 ald2 Alanine dehydrogenase 2 Staphylococcus aureus (strain USA300)
Q99TF4 3.01e-37 144 33 6 299 1 ald2 Alanine dehydrogenase 2 Staphylococcus aureus (strain N315)
Q931P7 5.53e-36 140 32 6 299 3 ald2 Alanine dehydrogenase 2 Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q4L750 1.44e-34 136 33 7 300 3 ald Alanine dehydrogenase Staphylococcus haemolyticus (strain JCSC1435)
A0QVQ8 3.69e-34 135 31 6 303 1 ald Alanine dehydrogenase Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Q08352 7.35e-34 135 33 5 297 1 ald Alanine dehydrogenase Bacillus subtilis (strain 168)
Q8CNW8 7.64e-34 134 33 5 299 3 ald Alanine dehydrogenase Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HNJ6 7.64e-34 134 33 5 299 3 ald Alanine dehydrogenase Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q49YD9 1.73e-31 128 31 6 299 3 ald Alanine dehydrogenase Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
P9WQB1 3.67e-31 127 31 7 302 1 ald Alanine dehydrogenase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQB0 4.94e-31 127 31 7 302 3 ald Alanine dehydrogenase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P17556 9.82e-31 126 32 7 295 1 ald Alanine dehydrogenase Lysinibacillus sphaericus
P17557 3.6e-30 124 32 7 300 1 ald Alanine dehydrogenase Geobacillus stearothermophilus
Q8CX61 3.97e-30 124 35 6 298 3 ald Alanine dehydrogenase Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
Q6GGW9 7.83e-30 123 30 6 308 3 ald1 Alanine dehydrogenase 1 Staphylococcus aureus (strain MRSA252)
P99151 8.63e-30 123 30 6 308 1 ald1 Alanine dehydrogenase 1 Staphylococcus aureus (strain N315)
P63478 8.63e-30 123 30 6 308 3 ald1 Alanine dehydrogenase 1 Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HFY4 8.63e-30 123 30 6 308 3 ald1 Alanine dehydrogenase 1 Staphylococcus aureus (strain COL)
Q2FH00 8.63e-30 123 30 6 308 3 ald1 Alanine dehydrogenase 1 Staphylococcus aureus (strain USA300)
Q2YY66 1.56e-29 122 31 7 308 3 ald1 Alanine dehydrogenase 1 Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q8NWQ3 2.35e-29 122 29 6 310 3 ald1 Alanine dehydrogenase 1 Staphylococcus aureus (strain MW2)
Q6G9C3 2.35e-29 122 29 6 310 3 ald1 Alanine dehydrogenase 1 Staphylococcus aureus (strain MSSA476)
Q2FYJ2 9.79e-29 120 29 6 308 3 ald1 Alanine dehydrogenase 1 Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q6LX40 1.54e-28 119 35 7 298 1 ald Alanine dehydrogenase Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
Q9AIK2 2.19e-27 116 31 5 299 1 ald Alanine dehydrogenase Bilophila wadsworthia
E5Y944 2.19e-27 116 31 5 299 2 ald Alanine dehydrogenase Bilophila wadsworthia (strain 3_1_6)
P0C187 1.1e-25 105 57 1 90 3 pntAB NAD(P) transhydrogenase subunit alpha part 2 Rhodospirillum rubrum
Q2RSB3 1.1e-25 105 57 1 90 3 pntAB NAD(P) transhydrogenase subunit alpha part 2 Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1)
E1V931 9.74e-25 108 30 9 378 1 ald Alanine dehydrogenase Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)
P51995 2.25e-24 101 59 1 84 3 pntAB NAD(P) transhydrogenase subunit alpha part 2 Rickettsia prowazekii (strain Madrid E)
Q9CG73 2.67e-07 55 21 8 306 3 ceo N(5)-(carboxyethyl)ornithine synthase Lactococcus lactis subsp. lactis (strain IL1403)
P15244 1.09e-05 51 21 8 304 1 ceo N(5)-(carboxyethyl)ornithine synthase Lactococcus lactis subsp. lactis

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04765
Feature type CDS
Gene pntA
Product Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
Location 1008751 - 1010280 (strand: 1)
Length 1530 (nucleotides) / 509 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_667
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01262 Alanine dehydrogenase/PNT, C-terminal domain
PF05222 Alanine dehydrogenase/PNT, N-terminal domain
PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3288 Energy production and conversion (C) C NAD/NADP transhydrogenase alpha subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00324 proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] Nicotinate and nicotinamide metabolism
Metabolic pathways		 -

Protein Sequence

MRIGVPKERQSSETRVAATPATIVQLKKLGFDVVVETGAGHLASFDDNAYRDAGADIAGTQDVWQSDIIFKVNAPLDSEIPLMKAGSSLVSFIWPAQNPQLLEKLSAQGVNVFAMDSVPRISRAQSLDALSSMANIAGYRAIVEAANAFGRFFTGQITAAGKIPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVKEQVNSMGADFLELHFEEDAGSGDGYAKVMSEAFIKAEMALFAEQAKDVDIIVTTALIPGRPAPKLITKDMVESMKAGSVIVDLAAQNGGNCELTVPGEIHTTENGVKIIGYTDLAARLATQSSQLYGTNLVNLMKLMCKEKNGEITIDFDDVVIRGLTVVKAGEITWPAPPIQVSAQPQAKPAAVKAEKKPAKPMSPWLKYGLMALAFVLFAWLANVAPAEFLSHFTVFALSCVVGYYVVWNVSHALHTPLMAVTNAISGIIVVGALLQIGSGGWVTFFSFIAVLIASINIFGGFTVTQRMLKMFRKG

Flanking regions ( +/- flanking 50bp)

GTCAACGAACCTGCGGGTTGAATGAATAAGGGTACAGATAAGGGAACATTATGCGTATTGGTGTACCAAAAGAGCGACAGTCCAGTGAAACCCGGGTCGCCGCCACGCCGGCTACCATTGTACAACTGAAAAAACTCGGGTTTGATGTGGTTGTTGAAACAGGAGCCGGTCATCTTGCCAGTTTTGATGACAACGCTTACCGTGACGCCGGTGCAGATATCGCCGGCACACAGGATGTCTGGCAATCTGACATTATTTTTAAAGTGAATGCGCCGCTGGACAGCGAAATTCCGCTGATGAAAGCAGGCAGCTCTCTGGTCAGCTTTATCTGGCCCGCCCAAAACCCGCAACTGCTTGAAAAGTTGTCTGCACAGGGTGTTAACGTCTTTGCAATGGACTCCGTTCCGCGTATTTCCCGTGCTCAGTCACTGGATGCGCTAAGTTCGATGGCCAATATCGCCGGTTACCGCGCGATAGTTGAAGCCGCCAATGCATTCGGTCGTTTTTTCACCGGGCAAATCACTGCCGCCGGTAAAATTCCGCCTGCGAAAGTGCTGGTTATCGGTGCCGGTGTTGCCGGTCTTGCCGCGATTGGTGCCGCAGGCAGCCTGGGGGCGATAGTCCGCGCGTTCGATACCCGTCCTGAAGTAAAAGAACAGGTCAACAGTATGGGCGCTGATTTCCTCGAGCTGCATTTTGAGGAAGATGCAGGCAGCGGTGACGGTTACGCAAAAGTAATGTCAGAAGCCTTTATTAAGGCAGAAATGGCACTGTTTGCTGAACAGGCAAAAGACGTTGATATCATTGTGACCACCGCACTGATTCCGGGACGTCCTGCACCAAAACTCATCACAAAAGACATGGTTGAGTCGATGAAAGCGGGCAGTGTGATTGTCGATTTAGCCGCGCAAAACGGCGGTAACTGTGAACTGACAGTACCGGGTGAGATTCACACCACCGAAAACGGGGTGAAAATCATCGGTTATACCGATCTCGCCGCGCGTCTGGCAACACAGTCCTCTCAGCTTTACGGCACCAACCTGGTGAACCTGATGAAGCTGATGTGCAAAGAGAAAAACGGCGAAATCACGATTGATTTTGATGATGTGGTTATCCGTGGTCTGACCGTGGTAAAAGCCGGTGAAATCACCTGGCCGGCACCGCCGATTCAGGTTTCCGCTCAGCCACAAGCAAAACCTGCTGCGGTGAAAGCTGAGAAAAAACCGGCAAAACCAATGTCTCCGTGGCTGAAATACGGACTGATGGCACTGGCGTTTGTTCTGTTTGCCTGGCTCGCAAATGTCGCTCCGGCGGAGTTTTTATCCCACTTTACTGTTTTTGCGCTCTCCTGTGTGGTTGGTTACTACGTGGTCTGGAATGTCAGCCATGCACTGCACACGCCATTAATGGCGGTAACCAATGCGATTTCGGGCATTATTGTTGTCGGCGCACTTCTGCAAATAGGCAGCGGCGGCTGGGTAACATTTTTCTCCTTTATTGCGGTGCTGATTGCCAGTATCAATATCTTCGGCGGTTTTACCGTCACTCAGCGTATGCTTAAAATGTTTCGTAAGGGGTAATGAATATGTCTGGCGGAGTCGTTACAGCGGCATATATTGTTGCCGCAATC