Homologs in group_2529

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02310 FBDBKF_02310 89.1 Morganella morganii S1 cirA Outer membrane receptor protein, Fe transport
EHELCC_02780 EHELCC_02780 89.1 Morganella morganii S2 cirA Outer membrane receptor protein, Fe transport
NLDBIP_00680 NLDBIP_00680 89.1 Morganella morganii S4 cirA Outer membrane receptor protein, Fe transport
LHKJJB_01355 LHKJJB_01355 89.1 Morganella morganii S3 cirA Outer membrane receptor protein, Fe transport
HKOGLL_01395 HKOGLL_01395 89.1 Morganella morganii S5 cirA Outer membrane receptor protein, Fe transport

Distribution of the homologs in the orthogroup group_2529

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2529

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76115 3.6e-26 117 25 30 735 1 pqqU Pyrroloquinoline quinone transporter Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04685
Feature type CDS
Gene -
Product TonB-dependent receptor
Location 987025 - 989079 (strand: -1)
Length 2055 (nucleotides) / 684 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2529
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00593 TonB dependent receptor-like, beta-barrel
PF07715 TonB-dependent Receptor Plug Domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4772 Inorganic ion transport and metabolism (P) P Outer membrane receptor for Fe3+-dicitrate

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02014 iron complex outermembrane recepter protein - -

Protein Sequence

MQIIKNRRRLTHCLALTLSTAAPAAVVHAAATDTPADTLIVTAPRQSTTAPGVQQEKEKLESVAGGTNLVIVEKDTRLATLHDALDYQPGVLVQNFFGGIDQPRLNIRGSGVQSAPLARGILLMQDGLPVTDADGSFHISTLEMRDARMISVRRGANSLNPQSNTLGGELDLISYTGRDEQGRLRYEYGSYGREGLQTAFGGVSDDGKFDGRINFTYDHFDGYRKHSSSQRKTVRTNFGYVGDNVENRTWLSWTDLRFDVAGPVSEAVLDSDPTEVYPMVWLRDPHRNVEQLRVANRTDWQMDNQHISAGVWYIRTHDNFTTPAYYRFSQSHSEGAQLTWQMETDPVTWRAALAADHMGLDTNLMQNRRGTPMDKTPIGKFDGRADNIYASAGTGIHLTPELTLNLDIKSTHARRDVEKRSGTDTLDQSWTFWTPKAGVIWHPADNQRWFANISASQEPATFHEIINSSDGKLTKLDPQKGITFEIGGDGDFTEQLKWNVALYRSIIKDEYITTYDTEGNITGVFNYAAKTRHQGLEAGLNGVIAAGPGDVEYKLAWTWNDFRFMGGEYNGNYIAGIPRNMVSAEVMYRTGNWRFGPNIHWAPTDMAVDHENHLDIQKRKHYAVLGLRGSYQPADSWSLYMSLDNLTNEHYATTSVANRSVTAKDSTLFPGMGFSVNGGVTYNF

Flanking regions ( +/- flanking 50bp)

TATGCCCTCAAATAAAAATGAGAATCATTTCCATAACGAGGTCAGGGATAATGCAGATAATAAAAAACCGCCGCAGGCTGACACACTGTCTTGCGCTTACACTCAGTACCGCCGCACCGGCAGCCGTTGTTCATGCTGCCGCCACAGACACCCCGGCGGATACGCTTATCGTCACCGCCCCGCGCCAGAGTACGACAGCGCCCGGTGTACAACAGGAAAAAGAGAAACTGGAGAGTGTCGCGGGCGGCACCAATCTGGTGATCGTTGAAAAAGATACGCGCCTTGCCACATTGCATGATGCGCTGGATTATCAGCCCGGCGTACTGGTGCAAAACTTTTTCGGCGGTATTGATCAGCCCCGCCTGAATATCCGTGGCTCCGGTGTGCAGAGCGCCCCGCTGGCACGCGGTATTTTACTTATGCAGGACGGACTGCCGGTGACAGATGCGGACGGTAGTTTCCATATCAGCACCCTGGAAATGCGGGATGCCCGGATGATCAGTGTGCGGCGCGGCGCAAACAGTCTTAATCCGCAAAGTAACACCCTGGGCGGCGAGCTGGATCTTATCTCTTATACCGGACGCGATGAACAGGGACGGCTGCGCTATGAGTACGGCTCTTACGGGCGTGAAGGTCTGCAAACTGCCTTTGGCGGTGTTTCTGATGACGGCAAATTCGACGGGCGCATCAATTTCACTTACGACCATTTTGACGGCTACCGCAAGCATTCATCTTCACAGCGCAAAACGGTGCGCACTAATTTCGGTTATGTCGGGGATAATGTTGAAAACCGGACCTGGCTGAGCTGGACTGATCTGCGCTTTGATGTGGCGGGTCCCGTTTCTGAAGCCGTACTGGACAGTGATCCGACTGAAGTCTATCCGATGGTCTGGCTGCGCGACCCACACCGCAATGTTGAACAGCTCCGGGTTGCCAACCGCACAGACTGGCAGATGGATAATCAGCACATCAGTGCCGGGGTCTGGTATATCCGCACACATGATAATTTTACCACCCCGGCTTACTATCGTTTCAGTCAGAGCCACAGCGAAGGTGCGCAACTGACCTGGCAGATGGAAACAGATCCTGTGACCTGGCGCGCAGCACTGGCGGCGGATCATATGGGGCTGGATACAAATCTGATGCAGAACCGGCGCGGTACGCCGATGGATAAAACCCCTATCGGAAAATTTGACGGGCGCGCAGATAATATTTATGCCTCCGCCGGTACCGGTATTCATCTGACCCCGGAACTGACACTGAACCTGGATATAAAATCCACTCACGCCCGCCGGGATGTTGAAAAACGCAGCGGCACCGATACGCTGGATCAAAGCTGGACATTCTGGACACCAAAAGCCGGGGTTATCTGGCATCCGGCTGATAATCAGCGCTGGTTTGCCAACATCAGCGCCAGTCAGGAGCCCGCCACCTTCCATGAAATTATCAATTCATCAGACGGCAAGCTGACAAAACTCGATCCACAGAAAGGCATTACATTTGAAATCGGCGGTGACGGTGACTTCACAGAACAACTGAAATGGAATGTGGCGCTGTACCGCAGCATCATCAAAGATGAATACATCACCACATATGATACCGAAGGCAATATCACCGGCGTCTTTAACTATGCCGCCAAAACCCGCCATCAGGGACTGGAAGCCGGGCTGAACGGCGTTATTGCGGCAGGACCCGGTGATGTGGAATATAAACTCGCCTGGACCTGGAATGATTTCCGCTTTATGGGCGGTGAATACAACGGCAATTATATTGCGGGGATCCCACGTAATATGGTGTCAGCCGAAGTGATGTACCGCACCGGCAACTGGCGTTTCGGTCCGAATATTCACTGGGCACCGACTGATATGGCTGTCGATCACGAAAACCATCTTGATATTCAGAAACGCAAACATTATGCCGTGCTGGGTCTGAGAGGCAGCTATCAGCCTGCGGACAGTTGGTCACTCTATATGTCGCTGGATAACCTGACCAATGAGCACTACGCGACGACATCTGTGGCAAACCGCTCTGTGACTGCCAAAGACAGCACGCTTTTCCCTGGCATGGGCTTTAGTGTGAATGGTGGTGTTACCTATAATTTCTGATTTATACTCGTCATACTTCAGGATGCCCGGGTGTTGACTTCAGGCATCCT