Homologs in group_4015

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4015

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4015

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0DV91 0.000142 46 44 0 47 1 Ga0100609_101823 Retron Ec78 probable ATPase Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04360
Feature type CDS
Gene -
Product hypothetical protein
Location 922093 - 922812 (strand: -1)
Length 720 (nucleotides) / 239 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4015
Orthogroup size 1
N. genomes 1

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4637 General function prediction only (R) R Predicted ATPase

Protein Sequence

MIDDKIYFSDVKMSGDIELTTAADKSVYGFTGDNEADTSALLTSLFQLRYFSNRVIYNQPRTDDIHLTFKHCTEYSPVARQLHTDNYIIPAGDVKSRFLPFVHDEAVVYLAPPGDGMSVTIRDPDPDTQMHLLQHYGNTSDPGFISMPILINRIKDGYSEFTDTENLAVVDGTVFICMLENHLNAEWLERCMSLLQAVFPNTIFYLTTQSPVVLSQLEDGEAYRLFRDTDNVVRSQKQV

Flanking regions ( +/- flanking 50bp)

ACGCGAGATAGCCAGTGTTATCCTCCGCCTGACAAATAACAGGAGGTGTTATGATCGACGACAAGATATATTTTTCTGATGTAAAAATGAGCGGCGATATTGAGCTGACCACGGCGGCGGATAAATCAGTATATGGTTTTACCGGTGATAATGAGGCTGATACCAGCGCGCTGTTAACCAGTTTATTCCAGCTGCGTTATTTTTCTAACCGGGTTATTTATAATCAGCCGCGTACTGATGATATTCATCTGACGTTTAAACACTGTACTGAATATTCGCCGGTTGCACGGCAATTACACACCGACAATTATATTATCCCCGCCGGTGATGTCAAAAGTCGCTTTTTACCCTTTGTTCATGACGAAGCTGTAGTGTATCTCGCGCCTCCGGGTGATGGCATGTCTGTAACGATAAGAGATCCTGACCCGGATACTCAGATGCATTTATTACAACATTACGGCAATACGTCAGATCCGGGATTTATCTCCATGCCTATCTTAATTAATCGTATCAAAGACGGCTACAGTGAGTTTACGGATACCGAAAATCTGGCCGTGGTAGACGGTACGGTGTTTATCTGTATGCTGGAAAATCACCTGAATGCAGAATGGCTGGAACGTTGTATGTCATTACTGCAAGCTGTTTTCCCGAACACTATTTTTTATCTCACGACACAATCACCGGTTGTATTGTCACAACTGGAGGACGGTGAGGCATACCGCTTATTCCGTGATACGGATAATGTTGTCCGTTCGCAAAAACAGGTATAGAGACTCCCGCTTATTCCGGCGGTATCCTGACCGGACAAAGAGTATGGCTC