Homologs in group_623

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01990 FBDBKF_01990 89.2 Morganella morganii S1 rimJ ribosomal protein S5-alanine N-acetyltransferase
EHELCC_02460 EHELCC_02460 89.2 Morganella morganii S2 rimJ ribosomal protein S5-alanine N-acetyltransferase
NLDBIP_01000 NLDBIP_01000 89.2 Morganella morganii S4 rimJ ribosomal protein S5-alanine N-acetyltransferase
LHKJJB_01035 LHKJJB_01035 89.2 Morganella morganii S3 rimJ ribosomal protein S5-alanine N-acetyltransferase
HKOGLL_01075 HKOGLL_01075 89.2 Morganella morganii S5 rimJ ribosomal protein S5-alanine N-acetyltransferase
PMI_RS05335 PMI_RS05335 67.4 Proteus mirabilis HI4320 rimJ ribosomal protein S5-alanine N-acetyltransferase

Distribution of the homologs in the orthogroup group_623

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_623

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A950 2.9e-101 293 68 0 194 3 rimJ [Ribosomal protein uS5]-alanine N-acetyltransferase Shigella flexneri
P0A948 2.9e-101 293 68 0 194 1 rimJ [Ribosomal protein uS5]-alanine N-acetyltransferase Escherichia coli (strain K12)
P0A949 2.9e-101 293 68 0 194 3 rimJ [Ribosomal protein uS5]-alanine N-acetyltransferase Escherichia coli O157:H7
Q9I2H6 4.85e-44 147 43 1 186 3 rimJ [Ribosomal protein uS5]-alanine N-acetyltransferase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O31633 6.37e-20 85 29 1 155 3 yjcK Putative [ribosomal protein S5]-alanine N-acetyltransferase Bacillus subtilis (strain 168)
P05332 6.87e-13 67 27 4 179 4 p20 Uncharacterized N-acetyltransferase p20 Bacillus licheniformis
P96579 4.5e-08 53 24 4 182 1 ydaF Putative ribosomal N-acetyltransferase YdaF Bacillus subtilis (strain 168)
P94482 9.32e-06 47 23 0 84 3 ynaD Uncharacterized N-acetyltransferase YnaD Bacillus subtilis (strain 168)
P13857 0.00064 42 27 2 111 1 rimL Ribosomal-protein-serine acetyltransferase Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04335
Feature type CDS
Gene rimJ
Product ribosomal protein S5-alanine N-acetyltransferase
Location 915688 - 916272 (strand: 1)
Length 585 (nucleotides) / 194 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_623
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13302 Acetyltransferase (GNAT) domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1670 Translation, ribosomal structure and biogenesis (J)
Posttranslational modification, protein turnover, chaperones (O)		 JO Protein N-acetyltransferase, RimJ/RimL family

Protein Sequence

MFGYRANTPLVRFATDRLVVRLAHERDTHRISEYYCENEAYLKPWEPIRDRSHYHPSGWSSRLQLMTDMHRQGSAFHFLLLDPEENEVMGVANYSNVIRGVFFACYLGYSLGEKWQGKHYMQEALEPTIRFMQRQQGMHRIMANYMPHNQRSGQLLTRLGFEKEGYAKDYLMINGQWRDHVLTVLTTRDWVKPR

Flanking regions ( +/- flanking 50bp)

GAACCGTTGTTAAGCCTGCTTTAACCGGGTTCTCTGAGTGAGGGATTATGCTGTTCGGCTATCGCGCTAACACTCCGCTGGTTCGTTTTGCGACAGACAGACTGGTTGTCCGCCTGGCACATGAACGGGATACGCACCGTATCAGTGAATATTATTGTGAAAATGAAGCGTATCTAAAACCCTGGGAGCCCATCCGCGACCGCAGCCATTATCATCCTTCCGGCTGGTCTTCCCGCCTGCAACTGATGACGGATATGCACCGTCAGGGAAGCGCATTTCATTTTCTGCTGCTGGATCCGGAAGAAAATGAAGTCATGGGAGTGGCAAATTACAGTAATGTTATCCGCGGTGTCTTTTTTGCCTGTTATCTGGGTTACTCACTTGGTGAAAAATGGCAGGGAAAACATTATATGCAGGAAGCGCTGGAGCCGACCATCCGTTTTATGCAGCGCCAGCAGGGTATGCACCGCATCATGGCAAATTATATGCCGCATAATCAGCGCAGCGGGCAACTTCTTACGCGCCTCGGGTTTGAAAAAGAGGGCTATGCGAAAGATTATCTGATGATCAACGGGCAGTGGCGTGACCATGTTCTGACCGTACTGACCACCCGGGATTGGGTAAAGCCACGTTAACGGCGGGTTTTTCTGTCCCGCCCGCATTAACGTGATACTATTTCCGCCCT