Homologs in group_2493

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01630 FBDBKF_01630 92.9 Morganella morganii S1 manX PTS mannose transporter subunit IIAB
EHELCC_02100 EHELCC_02100 92.9 Morganella morganii S2 manX PTS mannose transporter subunit IIAB
NLDBIP_01360 NLDBIP_01360 92.9 Morganella morganii S4 manX PTS mannose transporter subunit IIAB
LHKJJB_00675 LHKJJB_00675 92.9 Morganella morganii S3 manX PTS mannose transporter subunit IIAB
HKOGLL_00715 HKOGLL_00715 92.9 Morganella morganii S5 manX PTS mannose transporter subunit IIAB

Distribution of the homologs in the orthogroup group_2493

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2493

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P69800 1.17e-160 454 70 2 327 3 manX PTS system mannose-specific EIIAB component Shigella flexneri
P69797 1.17e-160 454 70 2 327 1 manX PTS system mannose-specific EIIAB component Escherichia coli (strain K12)
P69798 1.17e-160 454 70 2 327 3 manX PTS system mannose-specific EIIAB component Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P69799 1.17e-160 454 70 2 327 3 manX PTS system mannose-specific EIIAB component Escherichia coli O157:H7
Q5XAF5 2.97e-80 250 39 4 332 1 manX PTS system mannose-specific EIIAB component Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
Q9RGG4 8.19e-57 184 56 0 148 1 sorB PTS system sorbose-specific EIIB component Lacticaseibacillus casei
P37081 7.89e-52 171 50 0 159 1 sorB PTS system sorbose-specific EIIB component Klebsiella pneumoniae
P26380 1.62e-44 152 47 0 149 1 levE PTS system fructose-specific EIIB component Bacillus subtilis (strain 168)
P42904 1.67e-24 100 34 2 157 4 agaV N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 2 Escherichia coli (strain K12)
P42909 3.62e-16 77 32 2 154 4 agaB N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 1 Escherichia coli (strain K12)
P26379 5.63e-14 71 35 2 111 1 levD PTS system fructose-specific EIIA component Bacillus subtilis (strain 168)
Q5XCC7 4.88e-13 69 27 1 137 1 M6_Spy0801 Probable phosphotransferase enzyme IIB component M6_Spy0801 Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
Q9RGG5 2.04e-07 52 29 5 128 1 sorA PTS system sorbose-specific EIIA component Lacticaseibacillus casei
P37080 5.76e-06 48 33 3 102 1 sorF PTS system sorbose-specific EIIA component Klebsiella pneumoniae
P36881 0.000151 44 22 2 142 3 yadI Putative phosphotransferase enzyme IIA component YadI Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03970
Feature type CDS
Gene manX
Product PTS mannose transporter subunit IIAB
Location 842078 - 843061 (strand: -1)
Length 984 (nucleotides) / 327 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2493
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF03610 PTS system fructose IIA component
PF03830 PTS system sorbose subfamily IIB component

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3444 Carbohydrate transport and metabolism (G) G Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02794 mannose PTS system EIIAB component [EC:2.7.1.191] Fructose and mannose metabolism
Amino sugar and nucleotide sugar metabolism
Metabolic pathways
Phosphotransferase system (PTS)		 -

Protein Sequence

MSIAIMIGTHGKAAEQLLRTTEMLIGEQENVSFIDFVPGENADTLYAKYNEKLPGLSTTDGVLFLVDTWGGSPFNAANRIVTEQDQAAGGTSNYEIVTGVNVPMLVETFMCRDDNPSLQELVAVALETGREGIRALKTQEAEAPKAAPAPKPAAKPAAPAGPGGHMIISLARIDDRLIHGQVATRWTKETNVKRIIVVSDDVAKDTVRSTLLKQVAPPGVTAHVVDVDKMIRVWNNPKYANERCMLLFTNPADVLRLVEGGVNITTVNIGGMAFHEGKKQVNNAISIDSDDIVAFKALNERNIELEARKVSTDSKIKMMDLISKAES

Flanking regions ( +/- flanking 50bp)

TTCTGTGTAATACACAAACACTATCCTGGCTGATGTTAAGGGGGAGAAAGGTGAGTATAGCCATTATGATTGGCACCCACGGTAAAGCCGCGGAGCAATTACTGCGCACGACTGAAATGTTGATTGGTGAACAGGAAAACGTTTCCTTCATCGACTTCGTTCCGGGGGAAAATGCCGACACACTGTATGCCAAGTACAATGAAAAGCTGCCCGGTTTATCAACTACCGACGGGGTATTATTCCTTGTCGATACCTGGGGCGGCAGCCCGTTCAACGCAGCAAACCGTATCGTCACTGAGCAGGATCAGGCGGCAGGCGGCACCAGTAATTATGAGATAGTCACAGGGGTGAATGTTCCGATGCTGGTAGAGACTTTTATGTGCCGTGATGATAACCCGTCATTGCAGGAACTGGTCGCTGTCGCACTCGAAACCGGCCGTGAAGGTATCCGCGCCCTGAAAACACAGGAAGCAGAAGCACCAAAAGCGGCACCAGCGCCAAAACCGGCTGCAAAACCTGCGGCACCTGCCGGTCCCGGCGGACATATGATTATTTCACTTGCGCGTATCGATGACCGTCTTATTCACGGTCAGGTTGCAACACGCTGGACCAAAGAAACGAATGTGAAGCGTATTATTGTCGTCAGTGATGATGTCGCAAAAGATACTGTCCGATCCACATTACTCAAGCAGGTAGCACCTCCGGGCGTTACTGCTCACGTCGTTGATGTCGATAAAATGATCCGTGTCTGGAATAACCCGAAATACGCCAATGAACGTTGTATGCTGCTGTTTACTAACCCGGCAGATGTACTGCGTCTGGTTGAGGGCGGTGTCAATATCACGACCGTGAATATCGGCGGGATGGCATTCCACGAAGGCAAGAAACAGGTTAATAATGCAATTTCTATCGATAGTGACGATATCGTTGCATTCAAGGCCTTAAATGAACGGAACATTGAGCTGGAAGCCCGCAAAGTGTCTACCGATTCAAAAATAAAAATGATGGATTTAATCAGCAAAGCTGAAAGTTAATTTGACCCATTACTCAATGCAAAATTTGTTTTTCACAACATGATTGGTTA