Homologs in group_4011

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4011

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4011

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9Z4N3 8.4e-20 83 39 2 121 1 silE Silver-binding protein SilE Salmonella typhimurium
Q9Z4N3 6.33e-17 75 38 1 98 1 silE Silver-binding protein SilE Salmonella typhimurium
Q9Z4N3 5.77e-06 47 47 0 44 1 silE Silver-binding protein SilE Salmonella typhimurium
Q47459 1.31e-17 77 39 3 123 1 pcoE Probable copper-binding protein PcoE Escherichia coli
Q47459 7.99e-12 62 39 2 96 1 pcoE Probable copper-binding protein PcoE Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03905
Feature type CDS
Gene -
Product hypothetical protein
Location 827686 - 828189 (strand: -1)
Length 504 (nucleotides) / 167 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4011
Orthogroup size 1
N. genomes 1

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Genomic region

Protein Sequence

MKSIMKKVITTAALMMIFSGAATAATQNTTRFSQMNEHEKAVVAHDMMNNGRSGAHQVMSSDHKNKVPAEQKAAENTTTGFSQMNQHEQAAVAHDMMNNGRAGQHQVISNKHSRLAGDKTDTAANNSTATPFSQMSQQERAAVSRDMMNNGRSGPHQLLAEQHRRQS

Flanking regions ( +/- flanking 50bp)

ATCATCCCATCGAACACAGCATACAACGCTAACCTTCATGGAGATATATTATGAAAAGCATTATGAAAAAAGTAATAACCACGGCTGCATTAATGATGATATTTTCCGGCGCAGCCACTGCTGCCACACAAAATACCACCCGCTTCAGTCAGATGAATGAGCATGAAAAAGCCGTGGTTGCGCACGATATGATGAATAACGGACGTTCCGGTGCGCACCAGGTAATGAGCAGTGACCATAAAAATAAAGTACCTGCTGAACAAAAAGCGGCTGAAAATACCACTACCGGGTTTTCACAGATGAATCAACATGAGCAGGCCGCTGTCGCACATGACATGATGAATAACGGACGCGCCGGGCAACATCAGGTTATCAGTAATAAACATAGCCGGCTTGCCGGTGATAAAACAGACACTGCTGCAAACAACAGTACCGCGACACCCTTTTCACAAATGAGTCAGCAGGAAAGAGCCGCCGTTTCCCGCGATATGATGAATAACGGGCGCTCAGGTCCGCATCAGTTACTTGCGGAACAACACCGCAGACAGAGTTAATTTTTTAATCCCCCATTTCCGTACTCTGTTGCTTTTTATTATTTCCTTGT