Homologs in group_1816

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13460 FBDBKF_13460 94.7 Morganella morganii S1 znuB ABC-type Mn2+/Zn2+ transport system, permease component
EHELCC_08635 EHELCC_08635 94.7 Morganella morganii S2 znuB ABC-type Mn2+/Zn2+ transport system, permease component
NLDBIP_08960 NLDBIP_08960 94.7 Morganella morganii S4 znuB ABC-type Mn2+/Zn2+ transport system, permease component
LHKJJB_05305 LHKJJB_05305 94.7 Morganella morganii S3 znuB ABC-type Mn2+/Zn2+ transport system, permease component
HKOGLL_05610 HKOGLL_05610 94.7 Morganella morganii S5 znuB ABC-type Mn2+/Zn2+ transport system, permease component
PMI_RS04975 PMI_RS04975 69.6 Proteus mirabilis HI4320 - metal ABC transporter permease

Distribution of the homologs in the orthogroup group_1816

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1816

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q56955 1.29e-150 426 73 1 279 3 yfeD Chelated iron transport system membrane protein YfeD Yersinia pestis
P44660 4.89e-123 355 61 1 274 3 HI_0359 Probable iron transport system membrane protein HI_0359 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q55282 9.47e-90 271 52 0 259 1 mntB Manganese transport system membrane protein MntB Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9KD29 8.83e-66 210 43 2 271 3 mntC Manganese transport system membrane protein MntC Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P44661 5.64e-65 207 40 1 276 3 HI_0360 Probable iron transport system membrane protein HI_0360 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q92AG0 1.45e-64 206 44 0 255 3 mntC Manganese transport system membrane protein MntC Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Q56954 2.31e-63 204 42 0 263 3 yfeC Chelated iron transport system membrane protein YfeC Yersinia pestis
Q8Y652 1.43e-61 199 43 0 255 3 mntC Manganese transport system membrane protein MntC Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
P42361 5.45e-60 195 41 0 252 3 scaB Manganese import system permease protein ScaB Streptococcus gordonii
P31309 1.43e-59 194 40 1 259 3 None Manganese import system permease protein ScaB Streptococcus parasanguinis
P31606 2.08e-54 181 38 1 251 3 None Uncharacterized membrane protein in ycf23-apcF intergenic region Cyanophora paradoxa
P42362 4.33e-49 167 38 2 259 3 None Manganese import system permease protein ScaB Streptococcus pneumoniae
O34500 1.59e-29 116 34 7 257 2 mntD Manganese transport system membrane protein MntD Bacillus subtilis (strain 168)
P73087 1.65e-29 115 29 4 269 3 slr2045 Uncharacterized membrane protein slr2045 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O35024 1.76e-26 110 33 6 267 2 mntC Manganese transport system membrane protein MntC Bacillus subtilis (strain 168)
Q9Z809 4.97e-21 93 26 2 270 3 CPn_0543 Probable metal transport system membrane protein CPn_0543/CP_0209/CPj0543/CpB0565 Chlamydia pneumoniae
Q9WXX9 4.31e-20 90 26 3 267 3 TM_0125 Probable metal transport system membrane protein TM_0125 Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P44691 4.36e-19 87 27 3 261 3 znuB High-affinity zinc uptake system membrane protein ZnuB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9PJX8 8.3e-19 87 26 6 280 3 TC_0698 Probable metal transport system membrane protein TC_0698 Chlamydia muridarum (strain MoPn / Nigg)
P96119 3.56e-18 86 30 6 258 3 troD Zinc transport system membrane protein TroD Treponema pallidum (strain Nichols)
O83079 4.02e-16 79 24 2 242 3 TP_0036 Probable metal transport system membrane protein TP_0036 Treponema pallidum (strain Nichols)
O84422 8.05e-16 79 26 7 296 3 CT_417 Probable metal transport system membrane protein CT_417 Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
P39832 2.36e-15 77 26 2 252 1 znuB High-affinity zinc uptake system membrane protein ZnuB Escherichia coli (strain K12)
Q89AJ1 2.89e-14 74 26 3 246 3 znuB High-affinity zinc uptake system membrane protein ZnuB Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P57402 2.35e-13 71 26 2 248 3 znuB High-affinity zinc uptake system membrane protein ZnuB Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
O34610 1.19e-12 70 23 1 247 1 znuB High-affinity zinc uptake system membrane protein ZnuB Bacillus subtilis (strain 168)
Q9Z8J7 1.15e-11 67 25 6 282 3 CPn_0346 Probable metal transport system membrane protein CPn_0346/CP_0414/CPj0346/CpB0353 Chlamydia pneumoniae
Q9PKW9 1.01e-10 64 26 4 232 3 TC_0342 Probable metal transport system membrane protein TC_0342 Chlamydia muridarum (strain MoPn / Nigg)
O84073 6.98e-10 62 25 3 233 3 CT_070 Probable metal transport system membrane protein CT_070 Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
O84072 9.08e-09 59 26 6 202 3 CT_069 Probable metal transport system membrane protein CT_069 Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q9PKX0 2.55e-07 55 24 4 186 3 TC_0341 Probable metal transport system membrane protein TC_0341 Chlamydia muridarum (strain MoPn / Nigg)
P96118 7.36e-07 53 25 2 208 3 troC Zinc transport system membrane protein TroC Treponema pallidum (strain Nichols)
Q8K9M7 8.14e-07 52 21 1 254 3 znuB High-affinity zinc uptake system membrane protein ZnuB Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q9Z8J6 0.000288 45 24 7 214 3 CPn_0347 Probable metal transport system membrane protein CPn_0347/CP_0413/CPj0347/CpB0354 Chlamydia pneumoniae

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03305
Feature type CDS
Gene -
Product metal ABC transporter permease
Location 704756 - 705610 (strand: -1)
Length 855 (nucleotides) / 284 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1816
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00950 ABC 3 transport family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1108 Inorganic ion transport and metabolism (P) P ABC-type Mn2+/Zn2+ transport system, permease component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11606 manganese/iron transport system permease protein ABC transporters -

Protein Sequence

MSDFLTSLFIDPFAFPFMQRAMFAAIITGAVCAVLSCFLVLKGWSLMGDAISHAVLPGIVLAFVMGIPIIIGAFVSGLFCAFATGYLKEHSRIKEDTVMGIVFSGMFALGLVLFTRIDTDQHLTHILFGNILGITQAELYQTMIIAGLTMVVLMIKYKDFMLYCFDPNQARVIGLPVRLLHYGLLSLLALTIVAALQAVGIILVIAMLISPGIIAFLLCRSFGKMIIVAIAVSVSSSYIGTVVSFHIDGATGACIVLVQALYFVIALIYNQLRLSALKHHKQIA

Flanking regions ( +/- flanking 50bp)

CGCCGCCGCGCCCGTCGTGAATCCGCCGCGTTACGCCGGGAGGCAAAATTATGAGTGATTTTCTGACCTCACTGTTTATTGACCCTTTTGCATTTCCGTTTATGCAGCGGGCCATGTTTGCGGCGATCATCACGGGCGCTGTCTGTGCCGTGCTCTCCTGCTTTCTGGTGCTCAAAGGCTGGTCGCTGATGGGGGATGCTATCTCTCATGCCGTGTTACCGGGAATTGTCCTCGCCTTTGTTATGGGCATCCCGATTATTATCGGTGCCTTTGTTTCGGGTTTATTCTGTGCCTTTGCCACCGGATACCTGAAAGAACACAGCCGGATCAAAGAAGATACGGTTATGGGGATTGTTTTTTCCGGCATGTTTGCGCTCGGCCTGGTTCTGTTTACCCGGATAGATACCGATCAGCATCTGACGCACATCCTGTTCGGCAATATTCTCGGGATCACACAGGCAGAGCTGTACCAGACAATGATAATTGCCGGGCTGACCATGGTTGTGCTGATGATAAAATACAAAGATTTCATGCTCTACTGTTTCGATCCGAACCAGGCGCGTGTTATCGGCTTACCTGTCCGCCTGCTGCATTACGGGCTGCTGTCACTGCTGGCACTGACCATTGTTGCCGCACTGCAGGCAGTCGGAATAATCCTTGTGATCGCCATGCTTATCTCGCCCGGCATCATTGCTTTCCTGTTGTGCCGCAGTTTCGGCAAAATGATCATAGTCGCCATTGCTGTATCAGTCAGCTCAAGTTACATCGGAACAGTTGTCAGCTTTCATATCGATGGTGCAACCGGTGCCTGTATCGTTCTGGTTCAGGCGCTCTATTTTGTTATTGCCCTGATTTATAACCAGCTCCGGTTATCCGCACTCAAACATCACAAACAGATAGCCTGATAACCCTGTACAGTGGCTGTTCCACGGATGGAATAACCACTGTTGTCCGG