Homologs in group_2970

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16535 FBDBKF_16535 75.0 Morganella morganii S1 - Mitomycin resistance protein
EHELCC_08400 EHELCC_08400 75.0 Morganella morganii S2 - Mitomycin resistance protein
NLDBIP_08725 NLDBIP_08725 75.0 Morganella morganii S4 - Mitomycin resistance protein
LHKJJB_05540 LHKJJB_05540 75.0 Morganella morganii S3 - Mitomycin resistance protein
HKOGLL_05375 HKOGLL_05375 75.0 Morganella morganii S5 - Mitomycin resistance protein

Distribution of the homologs in the orthogroup group_2970

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2970

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43486 3.8e-13 63 37 1 87 4 mcrB Mitomycin resistance protein McrB Streptomyces lavendulae

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03055
Feature type CDS
Gene -
Product helix-hairpin-helix domain-containing protein
Location 654432 - 654734 (strand: 1)
Length 303 (nucleotides) / 100 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2970
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF11731 Pathogenicity locus

Protein Sequence

MNPTKADRTNLKTFTDLPNVGKAAADDLRLLGYEKPEEITGSDPVIMYEMLCAITGVRQDPCVMDVFWSVTDFLGGQPAQSWWNYTERRKDHLKKMMSMR

Flanking regions ( +/- flanking 50bp)

GATAAATTATGTGATAATACGCGTATTATTAATACACACCGGATATCCCCATGAACCCGACCAAAGCTGACCGGACAAATCTGAAGACATTTACTGATTTACCTAACGTCGGGAAAGCGGCGGCAGATGATCTGCGCCTGCTGGGGTATGAAAAACCGGAAGAGATAACCGGCTCTGACCCGGTCATTATGTACGAAATGCTGTGTGCTATCACCGGCGTCCGCCAGGACCCCTGTGTGATGGATGTGTTCTGGTCAGTCACTGATTTTCTGGGGGGACAACCGGCACAGTCCTGGTGGAACTACACAGAGCGGCGTAAAGATCACCTGAAAAAAATGATGTCGATGCGCTGATTATGACGATTACCCGGGGTGGTCAGTCAGACTAATTCCGTCCAGGCTCA