Homologs in group_3818
1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.
| Locus tag | Identity | Source | Gene | Product | |
|---|---|---|---|---|---|
| PMI_RS09820 | PMI_RS09820 | 38.8 | Proteus mirabilis HI4320 | - | GPO family capsid scaffolding protein |
Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).
| Swissprot accession | Eval | Score | ID (%) | N gaps | Alignment length | Annot score | Gene | Description | Organism |
|---|---|---|---|---|---|---|---|---|---|
| P51719 | 5.27e-37 | 132 | 51 | 2 | 132 | 3 | None | Capsid assembly scaffolding protein | Haemophilus phage HP1 (strain HP1c1) |
| P25478 | 2.46e-20 | 88 | 33 | 4 | 164 | 1 | O | Capsid assembly scaffolding protein | Escherichia phage P2 |
| Source | Morganella psychrotolerans |
|---|---|
| Locus tag | F4V73_RS02475 |
| Feature type | CDS |
| Gene | - |
| Product | GPO family capsid scaffolding protein |
| Location | 523260 - 523781 (strand: 1) |
| Length | 522 (nucleotides) / 173 (amino acids) |
| Accession | term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object |
|---|---|
| Length | 2012992 nucleotides |
| Topology | linear |
| Plasmid | False |
| Orthogroup | group_3818 | |
|---|---|---|
| Orthogroup size | 2 | |
| N. genomes | 2 |
| PF05929 | Phage capsid scaffolding protein (GPO) serine peptidase |
|---|
MSESHLTTGWICVATEGESIDQRTIEAEWLTEMAETYDPGYYTALIWEEHNRKLENLGEVVAARADIVDGLTRLYLRLRPNLKLIEYNIKGQKLFCSIEVEDDFQGKGVFYLGGLAVTDSPASVGTDRLQFSINRSHFAKRNSRLSLSSPTRFNLSDGISSNKNRWFAAVSAG
GCCGCAGTGGATGAAGCCGCTATTCAGATTGATGAGGGAGTCTTTTCGCTATGAGTGAATCCCATTTAACCACCGGTTGGATCTGCGTAGCCACAGAAGGTGAAAGTATTGACCAGCGGACTATTGAAGCGGAATGGCTGACTGAAATGGCTGAGACCTACGACCCCGGCTATTACACTGCGCTGATATGGGAAGAGCATAACCGGAAACTGGAAAACTTAGGTGAAGTTGTGGCGGCACGGGCTGACATTGTGGACGGACTGACCCGGCTGTATCTGCGCCTGAGACCCAATTTAAAGCTGATCGAATACAACATAAAGGGACAGAAATTATTTTGCTCTATTGAGGTTGAAGACGATTTTCAGGGTAAAGGCGTGTTTTATCTGGGTGGTCTGGCGGTGACTGACAGCCCTGCCAGTGTGGGAACGGACAGGCTGCAATTCAGTATCAACCGTTCACACTTTGCCAAACGTAACAGCCGGTTATCACTGAGTTCACCGACCCGTTTCAACTTATCAGACGGCATAAGCAGTAATAAAAACCGCTGGTTTGCGGCTGTCTCCGCAGGCTGATATCAGGCCCGGTACAGACCGGGCCTATATCTGATGATAGTTATTTACCT
