Homologs in group_4002

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4002

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4002

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02455
Feature type CDS
Gene -
Product DUF262 domain-containing protein
Location 518994 - 520070 (strand: -1)
Length 1077 (nucleotides) / 358 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4002
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF03235 Protein of unknown function DUF262

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1479 Defense mechanisms (V) V DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains

Protein Sequence

MLINTNNYSIGELLDMLERKDLLVNKNYQRAAGLWPEGPCSYFIDTILEGFPFPKIYMYEFINRTDRRIKKEIVDGQQRITTIRRYVNNEFKVKGDNNHSGLFFRELDTEAQDNFLSYTVSADVIRNATRAEILQMFRRMNAYTLPLNNAEKRHSSYTGEFKWFINEMSDNLNEFFTEFGVFTDRQIIRMGDAEFISDCIISIEKGIVSASPAELGRLYNQYEGIFPKRDEYYAMLDETFRYISTILEPLRKSFLMKSYALHSLVTALIHAKFGIPEIVQHYNIAPINVFSTNDNLSLQRLLTLAQAHESKENDGHYSKYVWGTESSTNKTLRREARVLTILAALGCVVGEPQYDNIF

Flanking regions ( +/- flanking 50bp)

TCAGGTATAAAAATGTATTATTGTTAAAACTTCTACATAAGGTGGAATTCATGTTAATAAATACAAATAATTACAGTATTGGCGAATTACTAGACATGCTGGAACGCAAGGATTTACTTGTTAATAAAAACTATCAAAGAGCTGCAGGATTATGGCCTGAAGGACCTTGCAGCTATTTCATTGATACAATACTCGAGGGTTTTCCCTTCCCTAAAATTTACATGTATGAGTTTATTAACAGAACTGACCGACGAATAAAAAAAGAAATTGTTGATGGGCAACAACGAATAACAACCATCAGAAGATACGTCAATAATGAGTTCAAGGTTAAAGGTGATAATAATCACTCTGGTTTATTTTTTCGCGAACTAGATACAGAGGCTCAGGATAATTTTTTATCATATACAGTTTCAGCTGACGTAATCAGAAATGCAACTAGAGCAGAAATTTTGCAAATGTTTCGCAGAATGAATGCATATACCCTACCACTGAATAACGCAGAAAAAAGACATTCTTCTTACACTGGCGAATTCAAATGGTTTATTAATGAGATGTCCGATAATTTAAATGAATTCTTCACTGAATTTGGAGTTTTCACAGACCGTCAAATAATTAGAATGGGAGATGCAGAGTTTATATCAGATTGCATAATTTCAATTGAAAAAGGTATCGTTAGTGCTAGTCCAGCCGAATTAGGTAGACTTTACAACCAGTATGAAGGTATTTTCCCTAAGCGCGATGAGTATTATGCAATGCTTGATGAAACATTCCGCTACATTAGTACAATTCTTGAACCTTTGAGAAAAAGTTTCTTGATGAAATCTTATGCATTACATTCACTGGTTACAGCTTTAATACATGCAAAATTTGGTATTCCAGAAATAGTTCAACACTATAATATTGCACCGATAAATGTTTTTTCCACCAATGACAATCTATCACTTCAAAGATTACTTACTTTAGCCCAAGCACATGAAAGTAAAGAAAATGATGGGCACTATAGTAAGTATGTCTGGGGCACGGAGTCTAGTACAAATAAAACGTTACGTAGAGAGGCGAGGGTTTTAACTATATTAGCTGCTTTAGGTTGTGTCGTTGGAGAACCACAGTATGACAATATTTTTTGAAGAAACTTTAACAAAAATGAATAACAGGCTTCAAAAACTCGATAAATCAT