Homologs in group_549

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01315 FBDBKF_01315 81.1 Morganella morganii S1 tagH Type VI secretion system-associated FHA domain protein TagH
EHELCC_00230 EHELCC_00230 81.1 Morganella morganii S2 tagH Type VI secretion system-associated FHA domain protein TagH
NLDBIP_03230 NLDBIP_03230 81.1 Morganella morganii S4 tagH Type VI secretion system-associated FHA domain protein TagH
LHKJJB_04745 LHKJJB_04745 81.1 Morganella morganii S3 tagH Type VI secretion system-associated FHA domain protein TagH
HKOGLL_02300 HKOGLL_02300 81.1 Morganella morganii S5 tagH Type VI secretion system-associated FHA domain protein TagH
PMI_RS03660 PMI_RS03660 54.6 Proteus mirabilis HI4320 tagH type VI secretion system-associated FHA domain protein TagH

Distribution of the homologs in the orthogroup group_549

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_549

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02355
Feature type CDS
Gene tagH
Product type VI secretion system-associated FHA domain protein TagH
Location 500407 - 501666 (strand: -1)
Length 1260 (nucleotides) / 419 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_549
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00498 FHA domain
PF20232 C-terminal domain of Type VI secretion system FHA protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3456 Signal transduction mechanisms (T)
Intracellular trafficking, secretion, and vesicular transport (U)		 TU Predicted component of the type VI protein secretion system, contains a FHA domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11894 type VI secretion system protein ImpI - -

Protein Sequence

MDKPQLNFHLVNSNRLESGRAATAQFSVQGGTIGSNTDCTWSLQDSLGKVSGIQCRIVWQDQTFCLKTLTEPVRVNQTAIPRHAGAVRLSGGDIIDIGELRFKAHITMAGELYHDPMSVAPQDIISADSNPLDSLMDSRAIPPADAQITDTQTATVRSGYTNDPLKALDNESLTTDTGTQENDTDGLLADNLHSATRYASPLSDNHGNTIVQEYMDLPKLSATDDIPASDSEHIAVNPLMHGLEAHLPLRNSRQANDFLTEVGRTLKAAIEGLLILQKSQDNLRDKQLRPIEDNPLRLNVDYQEALRLLFGEERSPVHLSPTAAVSESLNNLQLHNQANQEAISVALDTMLDAFSPERLLARFAQYQRAGEQHEPDPDWAWKMYVSYYRELKSGRQQGFEKLFYDVYTHAYDRALRKSI

Flanking regions ( +/- flanking 50bp)

TAAACCCGAACTGAAGCCTTTCGTGACGATTTCTGTATTGGAATAACATGATGGATAAACCACAACTTAATTTTCATTTAGTAAACAGTAACCGACTGGAGAGCGGGCGGGCTGCGACGGCTCAATTTTCAGTTCAGGGCGGTACTATCGGCAGTAATACCGACTGCACCTGGTCACTCCAGGACAGTCTCGGGAAAGTATCCGGGATTCAGTGCCGTATTGTCTGGCAGGATCAGACTTTTTGCCTGAAAACACTGACAGAGCCTGTCCGCGTTAATCAGACGGCGATTCCACGTCATGCAGGTGCAGTACGTTTGTCCGGGGGCGATATCATTGATATTGGCGAACTCCGGTTTAAAGCACACATTACGATGGCCGGGGAACTTTATCATGACCCTATGTCTGTTGCCCCGCAGGATATTATTTCCGCGGATAGTAATCCGCTGGATAGTCTGATGGACAGCCGGGCAATTCCACCAGCAGATGCGCAGATAACCGATACTCAGACCGCAACAGTCCGCAGCGGTTATACCAATGATCCGCTGAAAGCGCTGGATAATGAGAGCCTTACCACAGATACAGGCACTCAGGAAAATGATACCGACGGCTTGCTGGCTGATAACCTTCATTCAGCCACCCGCTACGCATCGCCGCTGTCCGATAACCACGGAAACACCATTGTGCAGGAATATATGGATCTCCCCAAACTCTCCGCCACGGATGATATCCCGGCGTCTGACTCCGAACATATTGCCGTTAACCCCCTGATGCACGGGCTGGAAGCGCATCTTCCGCTGAGAAACTCACGCCAGGCAAATGATTTCCTGACCGAAGTCGGCCGGACATTGAAAGCGGCAATCGAAGGGTTGCTCATTTTGCAAAAAAGCCAGGATAACCTGAGAGACAAACAGTTACGCCCTATTGAAGATAATCCGTTACGGCTCAACGTGGATTATCAGGAAGCGTTACGCCTTCTGTTCGGCGAAGAGCGCAGCCCTGTACATCTTTCACCGACCGCTGCTGTCAGTGAGAGCCTGAATAACCTTCAGCTTCACAACCAGGCAAACCAGGAAGCCATCTCCGTGGCACTGGATACTATGCTGGATGCTTTTTCCCCCGAACGACTGCTGGCGCGCTTTGCCCAATATCAGCGGGCGGGAGAGCAGCATGAGCCGGATCCTGACTGGGCATGGAAAATGTATGTCAGTTATTACCGTGAACTGAAATCCGGCCGCCAACAGGGATTTGAAAAACTCTTCTATGACGTTTACACCCACGCATACGACCGGGCATTACGGAAAAGTATATAAAGGACGCACATCATGAGTGTGAAATTGCGATACGGATTGTTGTTACTGGT