Homologs in group_3993

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_3993

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3993

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02225
Feature type CDS
Gene -
Product HNH endonuclease signature motif containing protein
Location 468829 - 469680 (strand: -1)
Length 852 (nucleotides) / 283 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3993
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF13391 HNH endonuclease

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3440 Defense mechanisms (V) V Predicted restriction endonuclease

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07454 putative restriction endonuclease - -

Protein Sequence

MKKNSNDVPSNNFSCIHELGLTGEILSISTTDKKRGDLKLNDDYGPGKSGMWVIAENKKFDHVVLRIKEPNSTYYKVYTGRFLKLSSGENQKKKIVHFDQTTLVGISDTIPRKFNGGKFSGQGKTYVSIPISAEPIIDSSQNSEHPKSYRDGSKTTITTRPDQSKFSAAVRDNCKNRCVITGATMQCRTEAAHLIEHHKEGEPDKTNGLLLRRDIHALFDQGHCAINPTDMVVHFSSESLQNDKDLEKFNLTKIGPEKLKKQINKNNLLDRWKDFSKKYRKGQ

Flanking regions ( +/- flanking 50bp)

TATTAACTTCCACTATCTCTGGGGAATTTTAAGGTAAAAGGCACCTGAAAATGAAAAAAAATAGTAATGATGTCCCCTCTAACAATTTTAGCTGTATTCATGAACTTGGTCTGACTGGTGAAATACTCTCTATCAGTACTACTGATAAAAAAAGAGGCGACCTTAAGTTAAATGACGATTATGGTCCAGGAAAATCCGGTATGTGGGTCATCGCAGAAAATAAAAAATTTGATCACGTAGTTCTACGCATTAAAGAACCTAACTCAACATATTATAAGGTATATACTGGTCGCTTTTTAAAGCTGTCCTCTGGAGAGAACCAGAAAAAGAAAATTGTACATTTTGATCAAACAACACTCGTTGGTATCTCAGATACAATTCCTCGCAAGTTCAATGGTGGTAAGTTTAGTGGACAAGGGAAAACTTATGTATCAATCCCAATTTCAGCCGAACCTATCATAGATAGTTCACAAAATTCCGAGCATCCAAAAAGTTATCGTGACGGTTCCAAAACAACTATTACAACACGACCAGACCAGTCTAAATTCTCAGCTGCCGTCCGAGACAATTGTAAAAATCGATGTGTAATAACTGGTGCTACAATGCAATGTCGGACTGAAGCCGCTCATTTAATAGAACACCATAAAGAAGGCGAACCTGACAAAACAAATGGTTTGTTACTACGAAGAGATATACATGCACTCTTTGATCAAGGCCACTGTGCTATTAATCCTACAGATATGGTGGTGCACTTCAGCTCCGAATCACTTCAGAATGATAAAGATTTGGAAAAATTTAATCTAACTAAAATAGGACCAGAAAAATTAAAAAAACAAATTAATAAAAATAATCTCTTAGATCGTTGGAAAGATTTTTCGAAAAAGTATCGTAAGGGTCAGTAACTTCAATCTAACACCATGTAAACGGAACCAGTTAACCCAGCAGCCAACTG