Homologs in group_187

Help

8 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13095 FBDBKF_13095 65.2 Morganella morganii S1 - ATP-binding protein
EHELCC_19940 EHELCC_19940 66.3 Morganella morganii S2 - ATP-binding protein
EHELCC_19960 EHELCC_19960 65.2 Morganella morganii S2 - ATP-binding protein
NLDBIP_19815 NLDBIP_19815 66.3 Morganella morganii S4 - ATP-binding protein
NLDBIP_19940 NLDBIP_19940 65.2 Morganella morganii S4 - ATP-binding protein
LHKJJB_19770 LHKJJB_19770 66.3 Morganella morganii S3 - ATP-binding protein
LHKJJB_19905 LHKJJB_19905 65.2 Morganella morganii S3 - ATP-binding protein
HKOGLL_05975 HKOGLL_05975 65.2 Morganella morganii S5 - ATP-binding protein

Distribution of the homologs in the orthogroup group_187

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_187

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02170
Feature type CDS
Gene -
Product ATP-binding protein
Location 460160 - 460438 (strand: 1)
Length 279 (nucleotides) / 92 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_187
Orthogroup size 9
N. genomes 6

Actions

Genomic region

Domains

PF13856 ATP-binding sugar transporter from pro-phage

Protein Sequence

MGKFEFLLNRMDALTEQRMGITIHLNGQPVRAVEFHFLSEMGPISGDGVSYVIFTRGITPRRNDSVTVNGDTFIVTRILRCNGKPHIFIESE

Flanking regions ( +/- flanking 50bp)

TCCGGATGCGGCAGTTAAAATCAATATGTTCCTCCCGGGAACATCGTCGGATGGGTAAGTTTGAATTCTTGCTTAACCGAATGGATGCACTGACAGAACAACGAATGGGCATCACTATCCATCTTAACGGACAACCAGTTCGTGCGGTTGAGTTTCATTTTTTGTCGGAAATGGGACCCATAAGTGGTGACGGGGTCAGCTATGTCATTTTTACCCGTGGTATTACTCCGCGCCGTAATGACAGTGTAACGGTGAACGGAGACACATTTATTGTCACGCGTATCCTGCGTTGCAACGGCAAGCCGCATATTTTTATCGAGAGTGAATAATATGGAGGGTATCCGTCAGGCAATTAATAATCTCAATTCTATTAGTTTCA