Homologs in group_3989

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_3989

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3989

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P08365 4.01e-11 56 37 0 54 1 chpS Antitoxin ChpS Escherichia coli (strain K12)
P0AE72 1.12e-08 50 34 0 64 1 mazE Antitoxin MazE Escherichia coli (strain K12)
P0AE73 1.12e-08 50 34 0 64 3 mazE Antitoxin MazE Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02155
Feature type CDS
Gene -
Product AbrB/MazE/SpoVT family DNA-binding domain-containing protein
Location 459091 - 459336 (strand: 1)
Length 246 (nucleotides) / 81 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3989
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF04014 Antidote-toxin recognition MazE, bacterial antitoxin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2336 Defense mechanisms (V) V Antitoxin component MazE of the MazEF toxin-antitoxin module

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07172 antitoxin MazE - -

Protein Sequence

MSIAIKKWGNSQGVIIPTSILKQLGIEAGHKLDMYVENGNLVLSPVKKKFVFTEDYLVKNMTEFNSHADELAQVSGTEIGE

Flanking regions ( +/- flanking 50bp)

AATGTGGTTATACAATGTTTATACATTGTGGCGTCATAAGGGGGTGTTGAATGAGTATAGCCATTAAAAAATGGGGCAATAGTCAGGGTGTGATTATCCCAACATCGATCCTTAAGCAACTTGGTATAGAGGCGGGACACAAATTGGATATGTACGTTGAAAACGGAAACCTGGTTTTATCCCCTGTAAAGAAAAAATTTGTTTTTACAGAAGATTATCTCGTTAAAAATATGACAGAGTTTAATTCACATGCAGATGAATTAGCTCAGGTCAGCGGAACGGAAATTGGTGAATGAGCAAGGATTATATTCCCCGAAGAAACGATATTATCTGGCTTGATTTTGAA