Homologs in group_3811

Help

1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS14130 PMI_RS14130 33.5 Proteus mirabilis HI4320 - endonuclease/exonuclease/phosphatase family protein

Distribution of the homologs in the orthogroup group_3811

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3811

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02110
Feature type CDS
Gene -
Product hypothetical protein
Location 452713 - 453597 (strand: -1)
Length 885 (nucleotides) / 294 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3811
Orthogroup size 2
N. genomes 2

Actions

Genomic region

Domains

PF19580 Endonuclease/Exonuclease/phosphatase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2374 General function prediction only (R) R Predicted extracellular nuclease

Protein Sequence

MSPPGNKKVQSAANMADAVEVIADLFTKKKILFLALCEVNSESFEHISSALSKLGLPLSAQFMPDKTSTGGEFDIGYFYDPSQVDVAHGVAHTGRLGSSSVKIAQQLLMVIKEDSLSLINVLVSHWPSQVLKNADDFREECSKGLRRFVESLIHEKHQVILMGDYNDEPYSHSLFKNIHAINDRALVISQPDFWLYNPYWKTLVARMPFTVNEQQHDFGTCYSKSGNRNNWSTFDQIIFSGHFLSSGPWYLKESDTGVVLTDKLRAAIMDNKHCFDHMPVIGCISKREANHVSV

Flanking regions ( +/- flanking 50bp)

CATATTTGGAGGTTTTATTGGACTTTCATTTCGCATTCTGGAATTGTGCGATGTCACCACCAGGTAACAAAAAAGTGCAATCAGCAGCTAACATGGCTGATGCTGTTGAAGTCATTGCTGACCTATTTACCAAGAAAAAGATATTATTTTTGGCACTATGCGAAGTCAACAGTGAATCATTTGAACATATTTCAAGTGCACTTAGTAAACTTGGGTTGCCTCTTTCGGCACAGTTTATGCCTGACAAAACCTCAACAGGTGGTGAATTTGATATCGGCTATTTCTATGACCCGAGTCAGGTTGATGTTGCACATGGCGTTGCACATACCGGCAGACTAGGGTCGTCCTCTGTAAAAATTGCTCAGCAGCTGCTAATGGTTATTAAAGAGGATTCACTATCGCTTATAAACGTTCTTGTATCACATTGGCCAAGCCAAGTTCTTAAGAATGCAGATGATTTCAGAGAAGAGTGTTCAAAAGGTTTACGGCGTTTTGTAGAAAGTCTTATCCATGAAAAACATCAGGTTATATTGATGGGAGATTATAATGACGAACCATACTCACACAGTTTATTTAAGAATATACATGCCATTAACGATCGCGCTTTGGTAATTTCCCAGCCAGATTTTTGGCTCTATAATCCTTACTGGAAAACTCTTGTGGCCAGAATGCCGTTTACAGTTAATGAGCAACAGCATGACTTCGGCACATGCTACAGTAAATCAGGTAACCGCAATAACTGGTCTACTTTTGACCAAATCATTTTTTCGGGTCATTTCCTTAGCTCCGGTCCATGGTATCTGAAAGAATCTGACACAGGTGTCGTTTTGACCGATAAGCTACGCGCTGCCATAATGGATAACAAGCATTGTTTTGATCATATGCCAGTGATCGGATGCATTAGTAAAAGAGAGGCTAATCATGTTTCAGTTTAAAGATCTTATTCAAACAGGTATGGAATCAGCAAGTAATGTTGAGCAAAACC