Homologs in group_3980

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_3980

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3980

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P40601 6.19e-97 315 31 13 699 1 lip-1 Lipase 1 Photorhabdus luminescens
Q88QS0 6.17e-25 113 27 16 426 1 estP Esterase EstP Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P40604 2.21e-18 92 26 11 368 3 None Uncharacterized protein in trpE-trpG intergenic region Pseudomonas putida
Q6B6R8 5.01e-18 92 24 15 429 3 estA Esterase EstA Pseudomonas putida
O33407 5.01e-18 92 24 15 429 1 estA Esterase EstA Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P40603 6.79e-05 49 27 3 104 2 APG Anther-specific proline-rich protein APG (Fragment) Brassica napus
P37663 0.000128 47 19 3 163 4 yhjY Uncharacterized protein YhjY Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01890
Feature type CDS
Gene -
Product autotransporter domain-containing protein
Location 412638 - 414653 (strand: 1)
Length 2016 (nucleotides) / 671 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3980
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF00657 GDSL-like Lipase/Acylhydrolase
PF03797 Autotransporter beta-domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5571 General function prediction only (R) R Uncharacterized conserved protein YhjY, contains autotransporter beta-barrel domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12686 outer membrane lipase/esterase - -

Protein Sequence

MRNKLLCCTAVAFILSGSNVFAFDNFTVIGDSMSDGGNRGNDSRYLAGSYSKLYNEVLSEYYVGKALIPSNFGGENYAEGGATADKLSLPTIRTSDQQIDFYLSRNGGRANKNGLYVLWIGANDISHNVLSAVKGFDLHGLLHKGNEYLISPSADLAVASAKKLLDSGAGYVVVPSIPKAGLTPWTSVSIFSFMEDALGDKFDSQRLYKEMNDELKNKGEISNEKQRQEYIVDAFKTVLDKNGVPVPHSIVKLYQKIITDTENRITSQFNYSVDKGLAKLNGNIIRADVEKLFDEIIFSGKEYGFDDVLVPVCQIGIRSFHCKEGVETFHDDKVYLFSDWFHPSNEGHAVIAQYIASVIDAPYYATSLSKSLENVNYTHRLFLDGQLQSLRKNLSDNKFNVFGGYSGRYKSSQGNQFDLDGKDTNNDLNLGFSVRTSPMLAYGGMVSISDGNFKVNDQYQYDYNGKVVSLFMQVSAENGLWGNINTSYGDMKLDDIERKIQLGKATRKEKGKTDASSFGLAVNAGYDYSITENITTGPVIGYQYDKFKVDGYRENSDTSTAMHFGSQNQERNIVSGGWGISTQSLPVNPYFEIKYNHNLSDKPVSVKGAVNSTDTSFTRTGAESKDSWVSAKLGASAALTDNLNVFGVVNYNQESNHSNSVNYSVGLNYSF

Flanking regions ( +/- flanking 50bp)

TAAGTCTGATTATAAAATTCAGATTAAATCATCAATTAAAGGATTAATTCATGAGAAACAAACTTCTCTGTTGTACCGCCGTAGCATTTATATTATCAGGATCTAATGTATTTGCCTTTGATAACTTTACTGTAATCGGAGACAGTATGAGTGACGGAGGGAACAGAGGTAATGACAGCAGATATTTAGCCGGTTCTTACAGTAAATTATATAATGAAGTTTTATCCGAATATTATGTAGGTAAAGCATTGATACCTTCTAATTTTGGTGGTGAAAATTATGCTGAGGGTGGTGCAACGGCGGACAAACTGTCTCTGCCAACGATACGTACCAGCGACCAGCAGATCGATTTTTATCTGAGCCGAAATGGCGGGCGTGCCAATAAAAATGGACTATATGTTTTATGGATTGGTGCTAATGATATATCTCATAACGTCCTTAGCGCAGTAAAAGGTTTTGACTTACATGGTTTACTCCATAAAGGTAATGAATATTTAATTTCTCCGTCAGCAGATCTTGCTGTCGCCAGTGCAAAAAAACTATTAGATTCCGGTGCCGGATATGTTGTTGTACCCAGTATTCCTAAAGCCGGGTTGACCCCATGGACATCGGTGTCAATTTTTAGTTTTATGGAAGATGCTCTCGGTGATAAGTTTGATTCTCAGCGGTTATACAAAGAAATGAATGATGAGCTGAAAAACAAAGGTGAGATAAGCAATGAAAAGCAGCGCCAGGAATATATCGTTGATGCATTTAAAACGGTGCTGGATAAAAATGGTGTACCTGTTCCTCATTCTATAGTTAAGCTTTATCAGAAGATTATAACCGATACTGAAAACAGAATTACATCACAGTTTAACTATAGTGTAGATAAGGGATTGGCTAAATTAAATGGCAATATAATACGCGCTGACGTTGAAAAGCTGTTTGATGAAATCATTTTCTCAGGAAAAGAATATGGATTTGATGATGTACTGGTTCCGGTTTGTCAAATAGGTATCCGTTCTTTCCACTGTAAAGAAGGTGTTGAAACCTTCCATGACGATAAAGTGTATTTATTTTCAGATTGGTTCCATCCCAGCAATGAAGGGCATGCTGTTATTGCACAGTATATAGCGTCTGTTATTGATGCGCCTTATTATGCAACAAGCCTGTCTAAATCGCTGGAAAACGTCAATTATACTCATCGTCTGTTTCTTGACGGACAACTACAAAGTTTACGTAAAAATCTGAGTGATAATAAATTTAATGTATTTGGTGGTTATAGCGGCAGATATAAATCCTCACAAGGCAATCAATTCGATTTAGACGGCAAAGATACCAATAATGATCTGAATCTTGGTTTTTCTGTACGCACATCGCCGATGTTAGCTTATGGTGGGATGGTCAGTATTTCTGACGGAAACTTTAAAGTAAACGATCAATATCAGTATGATTATAACGGTAAAGTTGTATCACTGTTTATGCAGGTATCTGCTGAAAATGGCCTTTGGGGTAATATCAATACCAGCTATGGCGATATGAAACTGGATGATATTGAGCGTAAAATTCAGTTAGGTAAAGCGACCCGTAAAGAAAAAGGTAAAACGGATGCCAGCAGCTTTGGTTTAGCCGTGAACGCGGGTTATGACTATAGCATTACTGAGAATATAACTACCGGTCCGGTCATTGGTTACCAGTATGATAAATTCAAAGTAGATGGCTACCGTGAAAACTCGGATACCAGTACGGCTATGCATTTTGGCTCTCAGAATCAGGAGCGGAATATCGTGAGCGGAGGGTGGGGCATCAGTACGCAGTCATTGCCGGTAAACCCTTATTTTGAAATAAAATATAATCACAATTTAAGCGACAAGCCAGTGAGTGTTAAAGGTGCGGTTAACAGTACGGATACGTCATTTACCCGTACAGGTGCTGAATCAAAGGATAGCTGGGTGTCTGCAAAATTAGGTGCTTCAGCCGCATTGACGGATAATCTGAACGTGTTTGGGGTGGTTAATTACAACCAGGAAAGCAACCATAGTAACTCGGTTAATTACTCTGTTGGTCTTAATTATTCGTTCTGATTTTGAGTCTGGTACAGAGGGCATCTGACCAGCGGTCACTATCTCTGTAC