Homologs in group_3055

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18255 FBDBKF_18255 82.4 Morganella morganii S1 - VOC domain-containing protein
EHELCC_18290 EHELCC_18290 82.4 Morganella morganii S2 - VOC domain-containing protein
NLDBIP_18215 NLDBIP_18215 82.4 Morganella morganii S4 - VOC domain-containing protein
LHKJJB_18410 LHKJJB_18410 82.4 Morganella morganii S3 - VOC domain-containing protein
HKOGLL_18145 HKOGLL_18145 82.4 Morganella morganii S5 - VOC domain-containing protein

Distribution of the homologs in the orthogroup group_3055

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3055

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01785
Feature type CDS
Gene -
Product glyoxalase/bleomycin resistance/dioxygenase family protein
Location 393437 - 393886 (strand: -1)
Length 450 (nucleotides) / 149 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3055
Orthogroup size 6
N. genomes 6

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0346 Secondary metabolites biosynthesis, transport and catabolism (Q) Q Catechol 2,3-dioxygenase or related enzyme, vicinal oxygen chelate (VOC) family

Protein Sequence

MSDFPAVPGVLFVAGFGPVTREPARSKHFFADSIGLPLAPMDGAPDYLIADHDQLHGVKHFALWPLSLAAQSCFGQDTWPQTHPVPQAWVEFEVADLPAATRFLTEQGYPLLVADRTEPWGQSVTRLQSPEGLLVGLTITPWLRDNATE

Flanking regions ( +/- flanking 50bp)

CGGGGTAAATGTGTAAGATGGATTATCACCCCTCTGACGGAGTCTCTGTTATGTCTGATTTTCCTGCTGTTCCCGGCGTTTTGTTTGTTGCCGGTTTTGGTCCGGTTACCCGCGAGCCTGCGCGCAGTAAACATTTTTTTGCAGACAGTATCGGACTGCCGCTGGCACCGATGGACGGTGCGCCGGACTATCTGATTGCAGACCATGACCAGTTACACGGCGTAAAACATTTTGCGCTCTGGCCGCTCAGCCTGGCGGCACAATCCTGCTTTGGTCAGGATACATGGCCGCAGACTCACCCGGTGCCACAGGCGTGGGTGGAATTTGAGGTAGCCGATCTGCCCGCTGCCACCCGTTTTCTGACAGAGCAGGGCTATCCGCTGCTGGTTGCGGACAGAACGGAGCCGTGGGGACAATCCGTCACCCGCCTGCAAAGCCCGGAAGGTCTGCTGGTCGGGCTGACTATCACCCCGTGGCTGCGTGATAACGCCACAGAGTAATTATCCGGCGCCTGGTGGTTGTTATCCCTGTTACTGACGCAGGCTGACAG