Homologs in group_1202

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06975 FBDBKF_06975 83.7 Morganella morganii S1 ybjG undecaprenyl-diphosphate phosphatase
EHELCC_03995 EHELCC_03995 83.7 Morganella morganii S2 ybjG undecaprenyl-diphosphate phosphatase
NLDBIP_03995 NLDBIP_03995 83.7 Morganella morganii S4 ybjG undecaprenyl-diphosphate phosphatase
LHKJJB_09825 LHKJJB_09825 83.7 Morganella morganii S3 ybjG undecaprenyl-diphosphate phosphatase
HKOGLL_09150 HKOGLL_09150 83.7 Morganella morganii S5 ybjG undecaprenyl-diphosphate phosphatase
PMI_RS03310 PMI_RS03310 52.0 Proteus mirabilis HI4320 ybjG undecaprenyl-diphosphate phosphatase

Distribution of the homologs in the orthogroup group_1202

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1202

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75806 4.62e-67 207 51 1 202 1 ybjG Putative undecaprenyl-diphosphatase YbjG Escherichia coli (strain K12)
P94571 5.6e-16 75 26 3 193 1 bcrC Undecaprenyl-diphosphatase BcrC Bacillus subtilis (strain 168)
P42334 1.2e-10 61 29 5 162 3 bcrC Bacitracin transport permease protein BcrC Bacillus licheniformis
Q57819 1.92e-09 59 28 4 175 4 MJ0374 Uncharacterized protein MJ0374 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P80143 3.75e-08 54 33 2 100 1 sepP Undecaprenyl-diphosphatase Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
P76445 6.17e-07 51 29 6 169 1 lpxT Lipid A 1-diphosphate synthase Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01170
Feature type CDS
Gene ybjG
Product undecaprenyl-diphosphate phosphatase
Location 249058 - 249666 (strand: -1)
Length 609 (nucleotides) / 202 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1202
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01569 PAP2 superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0671 Lipid transport and metabolism (I) I Membrane-associated phospholipid phosphatase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19302 undecaprenyl-diphosphatase [EC:3.6.1.27] Peptidoglycan biosynthesis
Teichoic acid biosynthesis		 -

Protein Sequence

MLENLNHSLFLLINATPETPHSAIVLATLAAKYLVLLFPLVAAGFWLRGAPDNMPRQRRFVCKSAVTLLIGLTLSWIIGALYPHARPFAEPFGYSFLEHAPTASFPSNHGIIVFTFALGCLFWCNLRPGLLLMIPALIVAWSRVFLGVHWPVDMLGALITVLIACALTELLWSRLGQPLQNLLQSLYRRCFSLPIRKGWVQG

Flanking regions ( +/- flanking 50bp)

ATTTTATGTCAGGCTGTATATTTTCACAGGTGAGTATTAAGGAATTTATTGTGCTGGAAAATCTGAATCATTCATTGTTTCTTCTGATCAATGCCACTCCGGAAACGCCGCATTCCGCGATAGTGCTTGCCACACTGGCAGCAAAGTATCTGGTATTGCTGTTTCCGCTGGTTGCCGCCGGGTTCTGGCTGCGCGGAGCGCCTGACAATATGCCGCGCCAGCGCCGCTTTGTATGTAAAAGTGCCGTAACCTTACTGATTGGCCTGACTCTGTCATGGATTATCGGCGCACTTTACCCGCACGCCCGTCCGTTTGCCGAACCTTTCGGCTACAGTTTCCTTGAACATGCGCCAACCGCATCGTTCCCGAGCAACCACGGCATTATTGTGTTTACCTTTGCGCTGGGCTGCCTGTTCTGGTGCAATCTCCGGCCAGGTCTTCTGCTGATGATCCCGGCGCTGATTGTTGCATGGTCGCGGGTTTTCCTCGGTGTTCACTGGCCGGTTGATATGCTGGGCGCACTGATTACTGTCCTTATCGCATGCGCACTGACTGAGCTTCTCTGGAGCCGGTTGGGTCAGCCACTGCAAAACCTGCTCCAGTCTCTTTACCGGCGCTGTTTTTCCCTGCCTATCCGCAAAGGTTGGGTTCAGGGATAACTAAACAAACGTAAAGCAGAGAATACCGGCCAATATGCCGGTATTTTTTT