Homologs in group_3975

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_3975

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3975

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A8GBT4 0.0 609 93 0 320 3 rlmF Ribosomal RNA large subunit methyltransferase F Serratia proteamaculans (strain 568)
A1JU40 0.0 524 74 0 320 3 rlmF Ribosomal RNA large subunit methyltransferase F Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A4TM00 0.0 513 73 0 320 3 rlmF Ribosomal RNA large subunit methyltransferase F Yersinia pestis (strain Pestoides F)
A9R6I2 0.0 513 73 0 320 3 rlmF Ribosomal RNA large subunit methyltransferase F Yersinia pestis bv. Antiqua (strain Angola)
B1JH95 0.0 513 73 0 320 3 rlmF Ribosomal RNA large subunit methyltransferase F Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q669D4 0.0 513 73 0 320 3 rlmF Ribosomal RNA large subunit methyltransferase F Yersinia pseudotuberculosis serotype I (strain IP32953)
B2K7Y6 0.0 513 73 0 320 3 rlmF Ribosomal RNA large subunit methyltransferase F Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FGU1 0.0 513 73 0 320 3 rlmF Ribosomal RNA large subunit methyltransferase F Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q1CHT7 0.0 509 73 0 320 3 rlmF Ribosomal RNA large subunit methyltransferase F Yersinia pestis bv. Antiqua (strain Nepal516)
Q7CJ72 0.0 509 73 0 320 3 rlmF Ribosomal RNA large subunit methyltransferase F Yersinia pestis
Q1C6E5 0.0 509 73 0 320 3 rlmF Ribosomal RNA large subunit methyltransferase F Yersinia pestis bv. Antiqua (strain Antiqua)
C6D8Y7 2.05e-137 394 60 3 310 3 rlmF Ribosomal RNA large subunit methyltransferase F Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q6D958 6.76e-137 393 60 3 310 3 rlmF Ribosomal RNA large subunit methyltransferase F Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q6LIW6 1.83e-136 393 56 2 323 3 rlmF Ribosomal RNA large subunit methyltransferase F Photobacterium profundum (strain SS9)
Q4KHU0 3.09e-134 387 57 2 318 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Q3KHM8 9.93e-129 374 55 2 318 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas fluorescens (strain Pf0-1)
A7MEZ1 6.9e-128 370 56 3 310 3 rlmF Ribosomal RNA large subunit methyltransferase F Cronobacter sakazakii (strain ATCC BAA-894)
A6W2M9 1.51e-127 370 54 1 321 3 rlmF Ribosomal RNA large subunit methyltransferase F Marinomonas sp. (strain MWYL1)
Q11XA9 1.73e-126 367 53 1 319 3 rlmF Ribosomal RNA large subunit methyltransferase F Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465)
C1DPF6 1.77e-125 365 57 1 312 3 rlmF Ribosomal RNA large subunit methyltransferase F Azotobacter vinelandii (strain DJ / ATCC BAA-1303)
Q1I5F5 1.98e-125 364 56 2 310 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas entomophila (strain L48)
Q1H501 5.16e-125 364 51 2 331 3 rlmF Ribosomal RNA large subunit methyltransferase F Methylobacillus flagellatus (strain ATCC 51484 / DSM 6875 / VKM B-1610 / KT)
A4VP05 7.08e-125 363 55 2 311 3 rlmF Ribosomal RNA large subunit methyltransferase F Stutzerimonas stutzeri (strain A1501)
A5VZ65 1.27e-123 360 57 2 310 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1)
A0KHV5 1.91e-123 359 55 3 311 3 rlmF Ribosomal RNA large subunit methyltransferase F Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
B1JBB3 3.29e-123 358 56 2 311 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas putida (strain W619)
Q9HXG4 3.85e-123 359 56 1 313 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q02RZ9 3.85e-123 359 56 1 313 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas aeruginosa (strain UCBPP-PA14)
B7UVS7 3.85e-123 359 56 1 313 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas aeruginosa (strain LESB58)
Q88P77 4.53e-122 356 56 2 310 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
C3K6G1 5.25e-121 354 54 3 318 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas fluorescens (strain SBW25)
B0KQK4 1.04e-120 352 57 2 311 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas putida (strain GB-1)
Q4ZXI1 4.5e-120 351 54 2 311 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas syringae pv. syringae (strain B728a)
B4TQW9 6.29e-120 350 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Salmonella schwarzengrund (strain CVM19633)
B5EVS5 7.36e-120 350 54 3 306 3 rlmF Ribosomal RNA large subunit methyltransferase F Aliivibrio fischeri (strain MJ11)
B7NAA7 8.64e-120 350 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q8FJM4 2.41e-119 348 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
B7UM03 3.69e-119 348 54 2 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q3Z3X8 4.16e-119 348 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Shigella sonnei (strain Ss046)
Q323Y7 4.16e-119 348 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Shigella boydii serotype 4 (strain Sb227)
B2TVC2 4.16e-119 348 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1REB8 4.16e-119 348 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli (strain UTI89 / UPEC)
Q0TJP1 4.16e-119 348 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1A947 4.16e-119 348 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli O1:K1 / APEC
B7M782 4.16e-119 348 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli O8 (strain IAI1)
B7MQR1 4.16e-119 348 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli O81 (strain ED1a)
B7LC90 4.16e-119 348 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli (strain 55989 / EAEC)
B7MGR5 4.16e-119 348 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli O45:K1 (strain S88 / ExPEC)
A7ZJM2 4.16e-119 348 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli O139:H28 (strain E24377A / ETEC)
Q8ZQN4 5.18e-119 347 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4T083 5.18e-119 347 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Salmonella newport (strain SL254)
B5R792 5.18e-119 347 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QXT1 5.18e-119 347 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Salmonella enteritidis PT4 (strain P125109)
B5FP91 5.18e-119 347 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Salmonella dublin (strain CT_02021853)
A5FHX5 5.97e-119 348 53 1 307 3 rlmF Ribosomal RNA large subunit methyltransferase F Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101)
B5F0A4 6.51e-119 347 55 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Salmonella agona (strain SL483)
A6V0S3 7.82e-119 348 54 1 313 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas aeruginosa (strain PA7)
B5BC01 1.19e-118 347 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Salmonella paratyphi A (strain AKU_12601)
Q5PG24 1.19e-118 347 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q5DYC3 1.36e-118 347 54 3 306 3 rlmF Ribosomal RNA large subunit methyltransferase F Aliivibrio fischeri (strain ATCC 700601 / ES114)
P75782 1.86e-118 346 54 3 303 1 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli (strain K12)
B1IXG1 1.86e-118 346 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A7ZY64 1.86e-118 346 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli O9:H4 (strain HS)
B1X7D7 1.86e-118 346 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli (strain K12 / DH10B)
C4ZXX9 1.86e-118 346 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli (strain K12 / MC4100 / BW2952)
B1LM99 2.44e-118 346 54 2 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli (strain SMS-3-5 / SECEC)
B7LJV2 2.47e-118 346 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B7NNN9 2.61e-118 346 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli O7:K1 (strain IAI39 / ExPEC)
A4XY67 2.9e-118 347 55 2 317 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas mendocina (strain ymp)
Q83LU4 3e-118 345 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Shigella flexneri
Q0T6F4 3e-118 345 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Shigella flexneri serotype 5b (strain 8401)
A6T6Q1 3.16e-118 345 54 3 299 3 rlmF Ribosomal RNA large subunit methyltransferase F Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
A4W8E5 1.04e-117 344 55 2 299 3 rlmF Ribosomal RNA large subunit methyltransferase F Enterobacter sp. (strain 638)
Q32I85 1.07e-117 344 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Shigella dysenteriae serotype 1 (strain Sd197)
A9MSU1 1.58e-117 344 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4TC80 1.58e-117 344 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Salmonella heidelberg (strain SL476)
B5YS99 3.66e-117 343 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8X7W6 3.66e-117 343 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Escherichia coli O157:H7
Q48MF3 8.21e-117 343 54 2 310 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
Q887M4 7.05e-116 340 55 2 310 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
A9MIS5 9.16e-116 339 54 3 303 3 rlmF Ribosomal RNA large subunit methyltransferase F Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
A8AIX5 1.42e-115 339 52 3 310 3 rlmF Ribosomal RNA large subunit methyltransferase F Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
B5XYT7 2.31e-115 338 55 4 299 3 rlmF Ribosomal RNA large subunit methyltransferase F Klebsiella pneumoniae (strain 342)
A4SKI2 4.26e-115 338 53 3 311 3 rlmF Ribosomal RNA large subunit methyltransferase F Aeromonas salmonicida (strain A449)
Q12T32 3.9e-112 332 52 3 314 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
C3LMU1 2.99e-111 330 51 4 314 3 rlmF Ribosomal RNA large subunit methyltransferase F Vibrio cholerae serotype O1 (strain M66-2)
Q9KRM2 9.1e-111 328 51 4 314 3 rlmF Ribosomal RNA large subunit methyltransferase F Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A7N060 1.44e-110 329 49 2 322 3 rlmF Ribosomal RNA large subunit methyltransferase F Vibrio campbellii (strain ATCC BAA-1116)
Q8D935 4.66e-110 327 47 3 323 3 rlmF Ribosomal RNA large subunit methyltransferase F Vibrio vulnificus (strain CMCP6)
A8HA69 5.62e-109 325 47 2 334 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
B0TM80 9.89e-109 324 47 3 330 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella halifaxensis (strain HAW-EB4)
Q5LBA7 1.87e-108 321 51 2 304 3 rlmF Ribosomal RNA large subunit methyltransferase F Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2)
Q0HP08 3.96e-108 322 47 2 319 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella sp. (strain MR-4)
Q7MLD9 4.82e-108 322 47 3 323 3 rlmF Ribosomal RNA large subunit methyltransferase F Vibrio vulnificus (strain YJ016)
Q64RQ5 6.35e-108 319 52 2 304 3 rlmF Ribosomal RNA large subunit methyltransferase F Bacteroides fragilis (strain YCH46)
Q87Q26 7.93e-108 322 49 3 317 3 rlmF Ribosomal RNA large subunit methyltransferase F Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A6H0G2 1.24e-107 319 50 2 313 3 rlmF Ribosomal RNA large subunit methyltransferase F Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86)
A5F7R5 1.09e-106 318 51 3 314 5 rlmF Putative ribosomal RNA large subunit methyltransferase F Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
A3QJF9 7.68e-106 317 50 5 326 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella loihica (strain ATCC BAA-1088 / PV-4)
A6WHK9 8.21e-106 316 49 4 311 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella baltica (strain OS185)
Q47C26 8.34e-106 315 51 1 310 3 rlmF Ribosomal RNA large subunit methyltransferase F Dechloromonas aromatica (strain RCB)
B8E3W0 1.34e-105 315 49 4 311 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella baltica (strain OS223)
Q0I0H7 1.67e-105 315 47 2 317 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella sp. (strain MR-7)
A8G1Q8 5.34e-105 315 44 3 358 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella sediminis (strain HAW-EB3)
A3DAC9 7.73e-105 313 48 4 319 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella baltica (strain OS155 / ATCC BAA-1091)
B1KP42 1.6e-104 313 46 3 341 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella woodyi (strain ATCC 51908 / MS32)
A9KVB0 2.4e-104 312 48 4 319 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella baltica (strain OS195)
Q08A02 1.24e-103 310 46 2 329 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella frigidimarina (strain NCIMB 400)
Q6ANQ6 2.31e-103 308 50 4 301 3 rlmF Ribosomal RNA large subunit methyltransferase F Desulfotalea psychrophila (strain LSv54 / DSM 12343)
Q89YP0 3.73e-103 307 50 3 305 3 rlmF Ribosomal RNA large subunit methyltransferase F Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
A0KRF2 4.24e-103 309 48 3 306 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella sp. (strain ANA-3)
Q8EKF9 2.26e-102 307 48 2 313 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
A1SSI8 2.77e-102 305 46 0 298 3 rlmF Ribosomal RNA large subunit methyltransferase F Psychromonas ingrahamii (strain DSM 17664 / CCUG 51855 / 37)
A1RQ03 2.8e-102 307 48 4 315 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella sp. (strain W3-18-1)
A4Y1N1 2.8e-102 307 48 4 315 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Q4FVS6 8.81e-102 305 46 4 317 3 rlmF Ribosomal RNA large subunit methyltransferase F Psychrobacter arcticus (strain DSM 17307 / VKM B-2377 / 273-4)
A5WBC6 8.93e-100 299 47 2 307 3 rlmF Ribosomal RNA large subunit methyltransferase F Psychrobacter sp. (strain PRwf-1)
Q1QEW1 1.63e-99 299 46 4 317 3 rlmF Ribosomal RNA large subunit methyltransferase F Psychrobacter cryohalolentis (strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5)
Q3IBW7 2.1e-98 295 45 3 298 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudoalteromonas translucida (strain TAC 125)
Q15VI3 1.55e-97 294 46 2 314 3 rlmF Ribosomal RNA large subunit methyltransferase F Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)
Q21P11 1.74e-96 291 47 3 312 3 rlmF Ribosomal RNA large subunit methyltransferase F Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)
A1SBR7 7.02e-96 289 46 2 313 3 rlmF Ribosomal RNA large subunit methyltransferase F Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
Q482M9 9.48e-95 286 46 2 300 3 rlmF Ribosomal RNA large subunit methyltransferase F Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
A0M4S0 9.1e-90 272 46 6 295 3 rlmF Ribosomal RNA large subunit methyltransferase F Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803)
Q6GR37 1.08e-45 166 31 7 298 2 mettl16 RNA N6-adenosine-methyltransferase mettl16 Xenopus laevis
Q9CQG2 3.14e-43 159 30 7 297 1 Mettl16 RNA N6-adenosine-methyltransferase METTL16 Mus musculus
Q86W50 3.87e-43 159 30 7 298 1 METTL16 RNA N6-adenosine-methyltransferase METTL16 Homo sapiens
Q5ZIA0 9.51e-43 157 30 7 301 2 METTL16 RNA N6-adenosine-methyltransferase METTL16 Gallus gallus
Q6DC64 1.89e-42 155 29 7 297 2 mettl16 RNA N6-adenosine-methyltransferase mettl16 Danio rerio
A0A286LEZ7 1.15e-39 144 31 7 301 1 psiM Psilocybin synthase Psilocybe cyanescens
P0DPA9 1.79e-39 144 32 8 305 1 psiM Psilocybin synthase Psilocybe cubensis
O42662 1.89e-32 127 28 6 258 1 SPAC27D7.08c U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q61J97 3.76e-31 125 26 8 317 3 mett-10 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase Caenorhabditis briggsae
Q09357 2.67e-30 122 26 7 308 1 mett-10 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase Caenorhabditis elegans
Q7K3B9 3.83e-28 114 27 7 304 2 CG7544 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase Drosophila melanogaster
Q290Z2 1.81e-27 112 27 7 303 3 GA20428 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase Drosophila pseudoobscura pseudoobscura
Q554C9 3.84e-22 100 23 9 338 3 DDB_G0275203 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase Dictyostelium discoideum
B7VJ58 1.98e-05 48 24 5 163 3 VS_0507 tRNA1(Val) (adenine(37)-N6)-methyltransferase Vibrio atlanticus (strain LGP32)
Q8DEQ3 4.62e-05 47 26 5 149 3 VV1_0533 tRNA1(Val) (adenine(37)-N6)-methyltransferase Vibrio vulnificus (strain CMCP6)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01140
Feature type CDS
Gene rlmF
Product 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
Location 240118 - 241083 (strand: 1)
Length 966 (nucleotides) / 321 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3975
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF05971 RNA methyltransferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3129 Translation, ribosomal structure and biogenesis (J) J 23S rRNA A1618 N6-methylase RlmF

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06970 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] - -

Protein Sequence

MEKKKTFPQQKSGLHPRNRHRSRYDFPALIASCPALEPFVKPNAWGDISVDFASPAAVKMLNRALLQHFYGIEHWDIPADYLCPPIPGRADYLHHLADLLATGNGGEIPLGKGVAILDVGIGANCIYPIIGLREYGWRFTGSEIDPVSLNAAKMIVEMNPTLRNCVRLRLQKQPDSILNGIIGVAEKFDATLCNPPFHSSEQEAQASTRRKLHKLGKGEVADTPVQNFGGKNKELWCEGGEEAFVRKMVEESVSLAQNCLWFTSLISKNTTLPSIYHALKLAGAAEVRTIEMAQGQKISRFVAWTFHDAQQQAAWAAERWH

Flanking regions ( +/- flanking 50bp)

GGTATATGGTATCGTACGCGTCAGAAATACCTTTAAGAGAGCCCGTCACGGTGGAAAAAAAGAAAACCTTCCCGCAGCAAAAAAGCGGTTTGCACCCGCGTAACCGTCATCGCTCGCGCTATGATTTCCCGGCGCTGATTGCCAGTTGCCCTGCACTGGAGCCGTTCGTCAAGCCGAACGCCTGGGGCGATATCTCGGTAGATTTTGCCTCACCTGCGGCGGTTAAAATGCTCAACCGTGCGTTGCTGCAACATTTTTATGGCATCGAACACTGGGACATTCCCGCTGATTATCTGTGCCCGCCGATCCCCGGGCGTGCCGACTATTTACACCATCTGGCCGACCTGCTGGCGACCGGCAACGGCGGTGAAATCCCCCTCGGTAAAGGCGTGGCGATCCTTGATGTGGGCATTGGCGCCAACTGTATTTATCCGATAATTGGCCTGCGTGAATACGGCTGGCGTTTTACCGGTTCGGAGATTGATCCGGTATCGCTCAATGCAGCCAAAATGATCGTGGAGATGAACCCGACGCTGAGAAACTGTGTGCGTCTGCGTTTGCAAAAACAACCCGACTCTATTTTGAACGGCATCATCGGCGTGGCGGAGAAATTTGATGCCACACTGTGTAATCCACCGTTCCACAGCTCTGAACAGGAAGCGCAAGCCAGCACCCGCCGTAAACTGCACAAGCTGGGTAAAGGCGAGGTAGCCGATACGCCGGTACAGAACTTTGGCGGCAAAAATAAAGAGCTGTGGTGTGAAGGCGGTGAAGAAGCCTTTGTGCGTAAAATGGTAGAGGAGAGCGTTAGCCTGGCGCAAAACTGCCTGTGGTTCACCTCGTTGATTTCTAAAAACACTACCCTGCCTTCGATTTATCACGCGTTGAAGCTGGCGGGTGCGGCCGAAGTCCGGACCATTGAAATGGCGCAGGGGCAAAAAATCAGCCGCTTTGTGGCCTGGACTTTCCACGACGCACAACAGCAGGCCGCCTGGGCGGCAGAACGCTGGCATTAATTTCCCCGGTGCCGGTTCTTTTAAATTATGCGGATGGGTAATTTATGTTT