Homologs in group_1173

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06755 FBDBKF_06755 93.5 Morganella morganii S1 ssnA Cytosine/adenosine deaminase or related metal-dependent hydrolase
EHELCC_04215 EHELCC_04215 93.5 Morganella morganii S2 ssnA Cytosine/adenosine deaminase or related metal-dependent hydrolase
NLDBIP_04215 NLDBIP_04215 93.5 Morganella morganii S4 ssnA Cytosine/adenosine deaminase or related metal-dependent hydrolase
LHKJJB_10045 LHKJJB_10045 93.5 Morganella morganii S3 ssnA Cytosine/adenosine deaminase or related metal-dependent hydrolase
HKOGLL_08930 HKOGLL_08930 93.5 Morganella morganii S5 ssnA Cytosine/adenosine deaminase or related metal-dependent hydrolase
PMI_RS07050 PMI_RS07050 80.9 Proteus mirabilis HI4320 - cytosine deaminase

Distribution of the homologs in the orthogroup group_1173

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1173

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P25524 0.0 743 84 2 427 1 codA Cytosine deaminase Escherichia coli (strain K12)
O52063 8.9e-42 155 29 8 410 1 atzC N-isopropylammelide isopropyl amidohydrolase Pseudomonas sp. (strain ADP)
B9J8S0 1.03e-23 106 25 9 401 1 codAch2 Pterin deaminase Rhizobium rhizogenes (strain K84 / ATCC BAA-868)
P77554 4.97e-10 64 24 10 293 3 yahJ Uncharacterized protein YahJ Escherichia coli (strain K12)
P44058 2.1e-05 49 21 6 253 3 HI_0842 Uncharacterized protein HI_0842 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00905
Feature type CDS
Gene -
Product cytosine deaminase
Location 192032 - 193336 (strand: 1)
Length 1305 (nucleotides) / 434 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1173
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07969 Amidohydrolase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0402 Nucleotide transport and metabolism (F)
General function prediction only (R)		 FR Cytosine/adenosine deaminase or related metal-dependent hydrolase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01485 cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] Pyrimidine metabolism
Arginine and proline metabolism
Metabolic pathways
Nucleotide metabolism		 -

Protein Sequence

MLNQTIKHIHNIRLPERDGLWRIDIEHQKIKAIVPQVAGEVLPESLDGEGGLVTAPFVEPHIHLDTTQTAGQPSWNQSGTLFEGIERWAERKALLTHEDVKTRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKKEVAPWIDLQIVAFPQEGIMSYPNGEALLEEALRLGADVAGAIPHFEFTREYGVESLHKTFALAQKYDCLIDVHCDEIDDEQSRFVETVAALAHREGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLAADINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLKLITEYSARTLNLQDYGVAEGKRASLLILPAENGFDAVRRQVPVHYSVRDGRVIAQTQPAVTQIHLDKPETIRYGYTPHTEDQV

Flanking regions ( +/- flanking 50bp)

GCTTAATCCGTTACTGAATCGTCGTCGCACAACCCATCCGGAGATGACCCGTGCTTAATCAAACTATAAAACATATTCATAATATTCGTCTGCCTGAGCGTGATGGTTTATGGCGCATTGATATTGAACATCAGAAAATTAAAGCGATTGTCCCGCAGGTTGCCGGTGAAGTTTTACCGGAAAGCCTGGACGGAGAGGGCGGTCTGGTCACCGCGCCGTTTGTGGAGCCGCATATTCATCTGGACACCACACAAACTGCCGGTCAGCCCTCCTGGAACCAGTCCGGCACCCTGTTTGAAGGTATTGAACGCTGGGCTGAGCGCAAAGCGCTGCTGACACATGAAGATGTGAAAACCCGCGCATGGCAGACGCTGAAATGGCAGATTGCCAACGGTATCCAGCATGTCCGTACACATGTGGATGTGTCTGATGCCACACTGACTGCACTGAAAGCGATGCTGGAAGTAAAAAAAGAAGTCGCGCCGTGGATTGATTTACAGATTGTGGCGTTCCCGCAGGAAGGCATTATGTCCTATCCGAACGGAGAAGCATTGTTAGAAGAGGCACTGCGCCTGGGCGCTGATGTTGCCGGTGCTATTCCGCACTTTGAATTTACCCGCGAATACGGCGTGGAATCCCTGCATAAAACGTTTGCGCTGGCACAGAAATATGACTGCTTAATCGATGTGCATTGTGATGAAATTGATGATGAACAGTCGCGTTTTGTGGAAACAGTCGCTGCTCTTGCTCATCGCGAAGGTATGGGCGCGCGTGTGACCGCCAGTCACACCACAGCGATGCACTCTTATAACGGGGCATATACATCCCGCTTGTTCCGCCTGCTGAAAATGTCCGGTATTAACTTTGTGGCTAATCCGCTGGTGAACATTCACTTACAGGGTCGTTTTGATACTTATCCTAAACGCCGTGGGATTACCCGTGTGAAAGAGATGCTGGCTGCGGATATTAATGTCTGTTTCGGGCATGATGATGTGTTTGATCCCTGGTATCCGCTGGGAACGGCGAATATGCTCCAGGTGCTGCACATGGGGCTGCATGTCTGTCAACTGATGGGCTATGGTCAGATAAATGACGGGCTGAAATTGATCACTGAATACAGCGCGCGCACCCTGAATTTACAGGATTACGGCGTGGCGGAAGGAAAACGCGCCAGTCTGCTTATCCTGCCTGCGGAAAACGGATTTGACGCCGTGCGCCGCCAGGTACCGGTGCACTATTCTGTCCGTGACGGACGTGTGATAGCGCAAACACAACCTGCTGTCACACAAATCCATCTGGATAAGCCGGAAACTATCCGGTATGGCTACACACCTCACACTGAGGATCAGGTTTAAGATTAATGGTACGAAATTGCATGCGCATAGCATCAAACAGCACTACTTTT