Homologs in group_3974

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_3974

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3974

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00885
Feature type CDS
Gene -
Product tetratricopeptide repeat protein
Location 186159 - 186911 (strand: -1)
Length 753 (nucleotides) / 250 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3974
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF14559 Tetratricopeptide repeat

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4700 Function unknown (S) S Uncharacterized conserved protein ECs_4300, contains TPR-like domain

Protein Sequence

MPLLAAILYLIPAIYFAIHAVKNRQNYYWLFILFVFPVVGSITYAFSVWLPEFRHTRHANRLESKIKSVLNPDKDIREAQRQYDIAPTTEHCLMLADAYADKERYQDAAHYFNESLQGHNQSSPDILLRYADTLFHMEDYSRCKEILDTLTEHNPGFVSAPGHLLYARTLANLDRNNEADEEFKSLMAYQDRIEIKISYASFLIDNNRNHEALPFLEQVLTTYNLMPKSAQRFNRQWKEKATVLKQQITQ

Flanking regions ( +/- flanking 50bp)

GATAATTTTAATTCAATAAAATAACAACGGATATTACGAGGCGAGGCACGATGCCATTACTAGCTGCAATACTTTATTTAATCCCTGCCATTTATTTTGCTATCCATGCGGTCAAAAACCGGCAAAACTATTACTGGCTATTTATTTTATTTGTATTTCCCGTTGTCGGTAGTATTACTTACGCATTCTCTGTCTGGCTTCCTGAATTTCGTCATACCCGCCATGCCAACCGGCTGGAATCAAAAATAAAATCAGTTTTAAATCCGGATAAAGATATCAGGGAAGCACAACGTCAGTATGATATTGCACCAACAACCGAACATTGTCTGATGCTGGCAGATGCCTATGCCGACAAAGAGCGATATCAGGATGCAGCGCATTATTTTAATGAATCGTTACAAGGACATAATCAATCTTCACCGGATATATTGTTACGCTATGCAGATACTCTGTTTCACATGGAAGACTATTCGCGTTGTAAAGAAATACTGGACACACTAACAGAACATAACCCCGGATTTGTTTCTGCCCCCGGACATTTATTATATGCCCGCACATTAGCAAATTTAGACAGAAATAATGAAGCTGATGAAGAGTTTAAATCATTGATGGCGTATCAGGATCGCATTGAAATTAAAATAAGCTATGCCTCTTTTCTTATTGATAATAATCGTAATCACGAAGCGCTCCCGTTTCTTGAGCAGGTATTAACAACCTATAATTTAATGCCGAAATCAGCACAACGATTTAACAGACAATGGAAAGAAAAAGCCACTGTATTAAAGCAACAGATAACCCAATAATGTGTACTCTGTTACTCCGAATAATTCGGGATACCTGCAGGTGACAAGCT